[HTML][HTML] Abundance of ethnically biased microsatellites in human gene regions

N Kinney, L Kang, L Eckstrand, A Pulenthiran… - PLoS …, 2019 - journals.plos.org
Microsatellites–a type of short tandem repeat (STR)–have been used for decades as
putatively neutral markers to study the genetic structure of diverse human populations …

Detecting tandem repeat expansions using short-read sequencing for clinical use

MF Bennett, A Tucci, M Bahlo - Genomic structural variants in nervous …, 2022 - Springer
Repeat expansion disorders are a unique class of genetic diseases caused by expansions
of short tandem repeats. Until recently, these pathogenic variations were detected with locus …

Genetics and Epigenetics of ASD

BA Mojarad, F Qaiser, RKC Yuen - … Pediatrics: Genetic and Environmental …, 2023 - Springer
Autism spectrum disorder (ASD) is a childhood-onset, life-long neurodevelopmental
disorder, which is both genetically and clinically heterogeneous. Over the past few decades …

Optical genome mapping enables accurate repeat expansion testing

B van der Sanden, K Neveling, S Shukor… - bioRxiv, 2024 - biorxiv.org
Short tandem repeats (STRs) are amongst the most abundant class of variations in human
genomes and are meiotically and mitotically unstable which leads to expansions and …

Comparison of NGS panel and Sanger sequencing for genotyping CAG repeats in the AR gene

MS Rocca, M Ferrarini, A Msaki… - … Genetics & Genomic …, 2020 - Wiley Online Library
Background The androgen receptor (AR) is a nuclear receptor, encoded by the AR gene on
the X chromosome. Within the first exon of the AR gene, two short tandem repeats (STR) …

[HTML][HTML] Evidence and practices of the use of next generation sequencing in patients with undiagnosed autosomal dominant cerebellar ataxias: a review

LE Novis, M Spitz, M Jardim, S Raskin… - Arquivos de Neuro …, 2020 - SciELO Brasil
Autosomal dominant cerebellar ataxias (ADCA) are heterogeneous diseases with a highly
variable phenotype and genotype. They can be divided into episodic ataxia and …

Identification de gènes impliqués dans les ataxies épisodiques par combinaison de séquençages génomique et transcriptomique

S Audet - 2022 - papyrus.bib.umontreal.ca
Cette étude pilote vise à développer une méthode d'analyse intégrative qui permet
d'augmenter le taux de réussite du diagnostic clinique des mutations génétiques rares. De …

A genome-wide atlas of recurrent repeat expansions in human cancer

GS Erwin, G Gürsoy, R Al-Abri, A Suriyaprakash… - bioRxiv, 2022 - biorxiv.org
Expansion of a single repetitive DNA sequence, termed a tandem repeat (TR), is known to
cause more than 50 diseases. However, repeat expansions are often not explored beyond …

[HTML][HTML] VarSCAT: A computational tool for sequence context annotations of genomic variants

N Wang, S Khan, LL Elo - PLoS Computational Biology, 2023 - journals.plos.org
The sequence contexts of genomic variants play important roles in understanding biological
significances of variants and potential sequencing related variant calling issues. However …

[HTML][HTML] Puzzling our roots: What does diversity have to do with genetics and disease

K Gultig - 2023 - vusci.org
2001-a breakthrough year for geneticists: the year in which the most important biological
code was published. Groups from the US, UK, Japan, Germany and China collaborated to …