Understanding 3D genome organization by multidisciplinary methods
I Jerkovic, G Cavalli - Nature Reviews Molecular Cell Biology, 2021 - nature.com
Understanding how chromatin is folded in the nucleus is fundamental to understanding its
function. Although 3D genome organization has been historically difficult to study owing to a …
function. Although 3D genome organization has been historically difficult to study owing to a …
Sequencing-based methods and resources to study antimicrobial resistance
Antimicrobial resistance extracts high morbidity, mortality and economic costs yearly by
rendering bacteria immune to antibiotics. Identifying and understanding antimicrobial …
rendering bacteria immune to antibiotics. Identifying and understanding antimicrobial …
Principles of genome folding into topologically associating domains
Understanding the mechanisms that underlie chromosome folding within cell nuclei is
essential to determine the relationship between genome structure and function. The recent …
essential to determine the relationship between genome structure and function. The recent …
[HTML][HTML] Multiscale structuring of the E. coli chromosome by nucleoid-associated and condensin proteins
VS Lioy, A Cournac, M Marbouty, S Duigou… - Cell, 2018 - cell.com
As in eukaryotes, bacterial genomes are not randomly folded. Bacterial genetic information
is generally carried on a circular chromosome with a single origin of replication from which …
is generally carried on a circular chromosome with a single origin of replication from which …
Engineered live bacteria suppress Pseudomonas aeruginosa infection in mouse lung and dissolve endotracheal-tube biofilms
R Mazzolini, I Rodríguez-Arce, L Fernández-Barat… - Nature …, 2023 - nature.com
Engineered live bacteria could provide a new modality for treating lung infections, a major
cause of mortality worldwide. In the present study, we engineered a genome-reduced …
cause of mortality worldwide. In the present study, we engineered a genome-reduced …
Walking along chromosomes with super-resolution imaging, contact maps, and integrative modeling
Chromosome organization is crucial for genome function. Here, we present a method for
visualizing chromosomal DNA at super-resolution and then integrating Hi-C data to produce …
visualizing chromosomal DNA at super-resolution and then integrating Hi-C data to produce …
Building structural models of a whole mycoplasma cell
Building structural models of entire cells has been a long-standing cross-discipline
challenge for the research community, as it requires an unprecedented level of integration …
challenge for the research community, as it requires an unprecedented level of integration …
Multiscale dynamic structuring of bacterial chromosomes
VS Lioy, I Junier, F Boccard - Annual review of microbiology, 2021 - annualreviews.org
Since the nucleoid was isolated from bacteria in the 1970s, two fundamental questions
emerged and are still in the spotlight: how bacteria organize their chromosomes to fit inside …
emerged and are still in the spotlight: how bacteria organize their chromosomes to fit inside …
A chromosomal loop anchor mediates bacterial genome organization
Nucleoprotein complexes play an integral role in genome organization of both eukaryotes
and prokaryotes. Apart from their role in locally structuring and compacting DNA, several …
and prokaryotes. Apart from their role in locally structuring and compacting DNA, several …
Smchd1 regulates long-range chromatin interactions on the inactive X chromosome and at Hox clusters
N Jansz, A Keniry, M Trussart, H Bildsoe… - Nature structural & …, 2018 - nature.com
The regulation of higher-order chromatin structure is complex and dynamic, and a full
understanding of the suite of mechanisms governing this architecture is lacking. Here, we …
understanding of the suite of mechanisms governing this architecture is lacking. Here, we …