Catalytic DNA: scope, applications, and biochemistry of deoxyribozymes

SK Silverman - Trends in biochemical sciences, 2016 - cell.com
The discovery of natural RNA enzymes (ribozymes) prompted the pursuit of artificial DNA
enzymes (deoxyribozymes) by in vitro selection methods. A key motivation is the conceptual …

Catalytic nucleic acids: biochemistry, chemical biology, biosensors, and nanotechnology

L Ma, J Liu - Iscience, 2020 - cell.com
Since the initial discovery of ribozymes in the early 1980s, catalytic nucleic acids have been
used in different areas. Compared with protein enzymes, catalytic nucleic acids are …

A versatile approach towards nucleobase‐modified aptamers

F Tolle, GM Brändle, D Matzner… - Angewandte Chemie …, 2015 - Wiley Online Library
A novel and versatile method has been developed for modular expansion of the chemical
space of nucleic acid libraries, thus enabling the generation of nucleobase‐modified …

DNAzymes: selected for applications

D Morrison, M Rothenbroker, Y Li - Small Methods, 2018 - Wiley Online Library
DNA‐based enzymes, also known as deoxyribozymes or DNAzymes, are single‐stranded
DNA molecules with catalytic activity. DNAzymes do not exist in nature but can be isolated …

DNA catalysis: the chemical repertoire of DNAzymes

M Hollenstein - Molecules, 2015 - mdpi.com
Deoxyribozymes or DNAzymes are single-stranded catalytic DNA molecules that are
obtained by combinatorial in vitro selection methods. Initially conceived to function as gene …

Metal-dependent DNAzymes for the quantitative detection of metal ions in living cells: recent progress, current challenges, and latest results on FRET ratiometric …

K Hwang, Q Mou, RJ Lake, M Xiong… - Inorganic …, 2019 - ACS Publications
Many different metal ions are involved in various biological functions including metallomics
and trafficking, and yet there are currently effective sensors for only a few metal ions, despite …

Discovering covalent inhibitors of protein–protein interactions from trillions of sulfur (VI) fluoride exchange-modified oligonucleotides

Z Qin, K Zhang, P He, X Zhang, M Xie, Y Fu, C Gu… - Nature Chemistry, 2023 - nature.com
Molecules that covalently engage target proteins are widely used as activity-based probes
and covalent drugs. The performance of these covalent inhibitors is, however, often …

Nucleic acids as templates and catalysts in chemical reactions: target-guided dynamic combinatorial chemistry and in situ click chemistry and DNA/RNA induced …

P Saha, D Panda, J Dash - Chemical Society Reviews, 2023 - pubs.rsc.org
Nucleic acids play crucial roles in transferring cellular information and gene regulations.
DNA and RNA molecules have been associated with multiple human diseases and thus …

Artificially expanded genetic information systems for new aptamer technologies

E Biondi, SA Benner - Biomedicines, 2018 - mdpi.com
Directed evolution was first applied to diverse libraries of DNA and RNA molecules a quarter
century ago in the hope of gaining technology that would allow the creation of receptors …

Zn2+‐Dependent DNAzymes: From Solution Chemistry to Analytical, Materials and Therapeutic Applications

WJ Moon, Y Yang, J Liu - ChemBioChem, 2021 - Wiley Online Library
Since 1994, deoxyribozymes or DNAzymes have been in vitro selected to catalyze various
types of reactions. Metal ions play a critical role in DNAzyme catalysis, and Zn2+ is a very …