[HTML][HTML] A brief review of protein–ligand interaction prediction

L Zhao, Y Zhu, J Wang, N Wen, C Wang… - Computational and …, 2022 - Elsevier
The task of identifying protein–ligand interactions (PLIs) plays a prominent role in the field of
drug discovery. However, it is infeasible to identify potential PLIs via costly and laborious in …

Explainable artificial intelligence: A taxonomy and guidelines for its application to drug discovery

I Ponzoni, JA Páez Prosper… - Wiley Interdisciplinary …, 2023 - Wiley Online Library
Artificial intelligence (AI) is having a growing impact in many areas related to drug discovery.
However, it is still critical for their adoption by the medicinal chemistry community to achieve …

Planet: a multi-objective graph neural network model for protein–ligand binding affinity prediction

X Zhang, H Gao, H Wang, Z Chen… - Journal of Chemical …, 2023 - ACS Publications
Predicting protein–ligand binding affinity is a central issue in drug design. Various deep
learning models have been published in recent years, where many of them rely on 3D …

Prediction of potential commercially available inhibitors against sars-cov-2 by multi-task deep learning model

F Hu, J Jiang, P Yin - Biomolecules, 2022 - mdpi.com
The outbreak of COVID-19 caused millions of deaths worldwide, and the number of total
infections is still rising. It is necessary to identify some potentially effective drugs that can be …

DeepBindBC: A practical deep learning method for identifying native-like protein-ligand complexes in virtual screening

H Zhang, T Zhang, KM Saravanan, L Liao, H Wu… - Methods, 2022 - Elsevier
Identifying native-like protein–ligand complexes (PLCs) from an abundance of docking
decoys is critical for large-scale virtual drug screening in early-stage drug discovery lead …

Artificial intelligence and cheminformatics tools: a contribution to the drug development and chemical science

I Saifi, BA Bhat, SS Hamdani, UY Bhat… - Journal of …, 2023 - Taylor & Francis
In the ever-evolving field of drug discovery, the integration of Artificial Intelligence (AI) and
Machine Learning (ML) with cheminformatics has proven to be a powerful combination …

Exploring artificial intelligence in drug discovery: a comprehensive review

RK Bijral, I Singh, J Manhas, V Sharma - Archives of Computational …, 2021 - Springer
Drug discovery and development process is very lengthy, highly expensive and extremely
complex in nature. Traditional methods involve expensive techniques and take many years …

Prediction of Drug-Target Binding Affinity Based on Deep Learning Models

H Zhang, X Liu, W Cheng, T Wang, Y Chen - Computers in Biology and …, 2024 - Elsevier
The prediction of drug-target binding affinity (DTA) plays an important role in drug discovery.
Computerized virtual screening techniques have been used for DTA prediction, greatly …

Ai-bind: improving binding predictions for novel protein targets and ligands

A Chatterjee, R Walters, Z Shafi, OS Ahmed… - arXiv preprint arXiv …, 2021 - arxiv.org
Identifying novel drug-target interactions (DTI) is a critical and rate limiting step in drug
discovery. While deep learning models have been proposed to accelerate the identification …

Machine Learning for Sequence and Structure-Based Protein–Ligand Interaction Prediction

Y Zhang, S Li, K Meng, S Sun - Journal of Chemical Information …, 2024 - ACS Publications
Developing new drugs is too expensive and time-consuming. Accurately predicting the
interaction between drugs and targets will likely change how the drug is discovered …