Effects of molecular crowding on the structures, interactions, and functions of nucleic acids
S Nakano, D Miyoshi, N Sugimoto - Chemical reviews, 2014 - ACS Publications
Nucleic acids are excellent at recognizing complementary sequences through the formation
of Watson− Crick base pairs. Since the base pairing enables the highly selective …
of Watson− Crick base pairs. Since the base pairing enables the highly selective …
Transcription-coupled DNA repair: two decades of progress and surprises
PC Hanawalt, G Spivak - Nature reviews Molecular cell biology, 2008 - nature.com
Expressed genes are scanned by translocating RNA polymerases, which sensitively detect
DNA damage and initiate transcription-coupled repair (TCR), a subpathway of nucleotide …
DNA damage and initiate transcription-coupled repair (TCR), a subpathway of nucleotide …
Non-canonical DNA structures: Diversity and disease association
A complete understanding of DNA double-helical structure discovered by James Watson
and Francis Crick in 1953, unveil the importance and significance of DNA. For the last seven …
and Francis Crick in 1953, unveil the importance and significance of DNA. For the last seven …
Non-B DNA structure-induced genetic instability and evolution
J Zhao, A Bacolla, G Wang, KM Vasquez - Cellular and molecular life …, 2010 - Springer
Repetitive DNA motifs are abundant in the genomes of various species and have the
capacity to adopt non-canonical (ie, non-B) DNA structures. Several non-B DNA structures …
capacity to adopt non-canonical (ie, non-B) DNA structures. Several non-B DNA structures …
Conformational changes of non-B DNA
J Choi, T Majima - Chemical Society Reviews, 2011 - pubs.rsc.org
In contrast to B-DNA that has a right-handed double helical structure with Watson–Crick
base pairing under the ordinary physiological conditions, repetitive DNA sequences under …
base pairing under the ordinary physiological conditions, repetitive DNA sequences under …
DNA triple helices: biological consequences and therapeutic potential
A Jain, G Wang, KM Vasquez - Biochimie, 2008 - Elsevier
DNA structure is a critical element in determining its function. The DNA molecule is capable
of adopting a variety of non-canonical structures, including three-stranded (ie triplex) …
of adopting a variety of non-canonical structures, including three-stranded (ie triplex) …
Predicting thermal adaptation by looking into populations' genomic past
AJ Cortés, F López-Hernández… - Frontiers in …, 2020 - frontiersin.org
Molecular evolution offers an insightful theory to interpret the genomic consequences of
thermal adaptation to previous events of climate change beyond range shifts. However …
thermal adaptation to previous events of climate change beyond range shifts. However …
Interactions of small molecules with DNA junctions
The four natural DNA bases (A, T, G and C) associate in base pairs (A= T and G≡ C),
allowing the attached DNA strands to assemble into the canonical double helix of DNA (or …
allowing the attached DNA strands to assemble into the canonical double helix of DNA (or …
Replication stalling at unstable inverted repeats: interplay between DNA hairpins and fork stabilizing proteins
I Voineagu, V Narayanan… - Proceedings of the …, 2008 - National Acad Sciences
DNA inverted repeats (IRs) are hotspots of genomic instability in both prokaryotes and
eukaryotes. This feature is commonly attributed to their ability to fold into hairpin-or cruciform …
eukaryotes. This feature is commonly attributed to their ability to fold into hairpin-or cruciform …
Non-B DNA conformations, mutagenesis and disease
RD Wells - Trends in biochemical sciences, 2007 - cell.com
Recent discoveries have revealed that simple repeating DNA sequences, which are known
to adopt non-B DNA conformations (such as triplexes, cruciforms, slipped structures, left …
to adopt non-B DNA conformations (such as triplexes, cruciforms, slipped structures, left …