[HTML][HTML] Membrane attachment and fusion of HIV-1, influenza A, and SARS-CoV-2: resolving the mechanisms with biophysical methods

G Negi, A Sharma, M Dey, G Dhanawat, N Parveen - Biophysical reviews, 2022 - Springer
Attachment to and fusion with cell membranes are two major steps in the replication cycle of
many human viruses. We focus on these steps for three enveloped viruses, ie, HIV-1, IAVs …

Real-time biosensing bacteria and virus with quartz crystal microbalance: recent advances, opportunities, and challenges

F Bonyadi, M Kavruk, S Ucak, B Cetin… - Critical reviews in …, 2023 - Taylor & Francis
Continuous monitoring of pathogens finds applications in environmental, medical, and food
industry settings. Quartz crystal microbalance (QCM) is one of the promising methods for …

[HTML][HTML] Cellular chondroitin sulfate and the mucin-like domain of viral glycoprotein C promote diffusion of herpes simplex virus 1 while heparan sulfate restricts …

Y Abidine, L Liu, O Wallén, E Trybala, S Olofsson… - Viruses, 2022 - mdpi.com
The diffusion of viruses at the cell membrane is essential to reach a suitable entry site and
initiate subsequent internalization. Although many viruses take advantage of …

Probing the separation distance between biological nanoparticles and cell membrane mimics using neutron reflectometry with sub-nanometer accuracy

A Armanious, Y Gerelli, S Micciulla… - Journal of the …, 2022 - ACS Publications
Nanoparticle interactions with cellular membranes are controlled by molecular recognition
reactions and regulate a multitude of biological processes, including virus infections …

Particle Adsorption Using a Quartz Crystal Microbalance with Dissipation by Applying a Kelvin–Voigt-Based Viscoelastic Model and the Gauss–Newton Method

I Furikado, J Forsman, T Nylander - Analytical Chemistry, 2023 - ACS Publications
The use of a quartz crystal microbalance with dissipation (QCM-D) to study the adsorption of
particles larger than 100 nm, such as liposomes, viruses, and nano/micro-plastics, remains …

[HTML][HTML] Emerging insights into the structure-activity relationship of water-soluble polysaccharides in antiviral therapy

A Sharma, A Shahid, R Banerjee, KJ Kumar - European Journal of …, 2023 - Elsevier
This review provides an overview of recent advancements in understanding the antiviral
activities and mechanism of action of water-soluble polysaccharides (WSPs). Water-soluble …

[HTML][HTML] Structure and Role of O-Linked Glycans in Viral Envelope Proteins

S Olofsson, M Bally, E Trybala… - Annual review of …, 2023 - annualreviews.org
N-and O-glycans are both important constituents of viral envelope glycoproteins. O-linked
glycosylation can be initiated by any of 20 different human polypeptide O …

[HTML][HTML] Glycan recognition in human norovirus infections

VR Tenge, L Hu, BVV Prasad, G Larson, RL Atmar… - Viruses, 2021 - mdpi.com
Recognition of cell-surface glycans is an important step in the attachment of several viruses
to susceptible host cells. The molecular basis of glycan interactions and their functional …

Easy and rapid approach to obtaining the binding affinity of biomolecular interactions based on the deep learning boost

YF Chang, SY Chen, CC Lee, J Chen… - Analytical …, 2022 - ACS Publications
Recently, the deep learning (DL) dimension of artificial intelligence has received much
attention from biochemical researchers and thus has gradually become the key approach …

Synergistic Binding of SARS-CoV-2 to ACE2 and Gangliosides in Native Lipid Membranes

M Dey, A Sharma, G Dhanawat, D Gupta… - ACS Infectious …, 2024 - ACS Publications
Viruses utilize cell surface glycans and plasma membrane receptors to attain an adequate
attachment strength for initiating cellular entry. We show that SARS-CoV-2 particles bind to …