Hybridization properties of base-modified oligonucleotides within the double and triple helix motif

I Luyten, P Herdewijn - European journal of medicinal chemistry, 1998 - Elsevier
In this review we describe the influence of modified nucleobases in order to understand the
changes they introduce in double and triple helix forming oligomers with the aim to study …

Nucleic Acid Related Compounds. 93. A Solution for the Historic Problem of Regioselective Sugar− Base Coupling To Produce 9-Glycosylguanines or 7 …

MJ Robins, R Zou, Z Guo, SF Wnuk - The Journal of Organic …, 1996 - ACS Publications
Per (trimethylsilyl)-2-N-acylguanine derivatives and tetra-O-acylpentofuranoses were
coupled [tin (IV) chloride or titanium (IV) chloride catalysis] to give predominant formation of …

Nucleic acid triple helices: stability effects of nucleobase modifications

J Robles, A Grandas, E Pedroso… - Current Organic …, 2002 - ingentaconnect.com
In the last years DNA triplexes have been the subject of a very intense research effort, which
has been summarized in a vast number of books and reviews (see for example refs.[1-16]) …

Properties of triple helices formed by parallel-stranded hairpins containing 8-aminopurines

A Aviñó, M Frieden, JC Morales… - Nucleic acids …, 2002 - academic.oup.com
Parallel-stranded hairpins with a polypyrimidine sequence linked to a complementary purine
carrying 8-aminopurines such as 8-aminoadenine, 8-aminoguanine and 8 …

Parallel Clamps and Polypurine Hairpins (PPRH) for Gene Silencing and Triplex‐Affinity Capture: Design, Synthesis, and Use

A Aviñó, R Eritja, CJ Ciudad… - Current Protocols in …, 2019 - Wiley Online Library
Nucleic acid triplexes are formed when a DNA or RNA oligonucleotide binds to a polypurine‐
polypyrimidine‐rich sequence. Triplexes have wide therapeutic applications such as gene …

DNA-triplex stabilizing properties of 8-aminoguanine

R Soliva, R Güimil García, JR Blas, R Eritja… - Nucleic Acids …, 2000 - academic.oup.com
A DNA-triplex stabilizing purine (8-aminoguanine) is designed based on molecular
modeling and synthesized. The substitution of guanine by 8-aminoguanine largely stabilizes …

Hoogsteen-based parallel-stranded duplexes of DNA. Effect of 8-amino-purine derivatives

E Cubero, A Aviñó, BG de la Torre… - Journal of the …, 2002 - ACS Publications
The structure of parallel-stranded duplexes of DNA-containing a mixture of guanines (G) and
adenines (A) is studied by means of molecular dynamics (MD) simulation, as well as NMR …

Sequence Composition Effects on the Stabilities of Triple Helix Formation By Oligonucleotides Containing N7 -deoxyguanosine

H Brunar, PB Dervan - Nucleic acids research, 1996 - academic.oup.com
Abstract A nonnatural nucleoside, 7-(2-deoxy-β-D-erythro-pento-furanosyl)-guanine (d 7 G),
mimics protonated cytosine and specifically binds GC base pairs within a pyrimidine purine …

BisPNA Targeting to DNA: Effect of Neutral Loop on DNA Duplex Strand Invasion by aepPNA‐N7G/aepPNA‐C Substituted Peptide Nucleic Acids

PS Shirude, VA Kumar, KN Ganesh - 2005 - Wiley Online Library
Abstract N7‐Alkyl‐substituted guanine (N7G) as a CH+ mimic has been introduced into
aminoethylglycyl PNA (aegPNA) forming a hairpin through a neutral linker derived from bis …

[PDF][PDF] Destabilization of Quadruplex DNA by 8‐Aminoguanine

J López de la Osa, C González, R Gargallo… - …, 2006 - academia.edu
Oligonucleotides can interact in a very specific manner with homopurine–homopyrimidine
sequences of double-stranded DNA by forming triple helices (triplexes) that can be used to …