The ecology of hybrid incompatibilities
KA Thompson, Y Brandvain… - Cold Spring …, 2023 - cshperspectives.cshlp.org
Ecologically mediated selection against hybrids, caused by hybrid phenotypes fitting poorly
into available niches, is typically viewed as distinct from selection caused by epistatic …
into available niches, is typically viewed as distinct from selection caused by epistatic …
Learning epistasis and residue coevolution patterns: Current trends and future perspectives for advancing enzyme engineering
Engineering proteins and enzymes with the desired functionality has broad applications in
molecular biology, biotechnology, biomedical sciences, health, and medicine. The vastness …
molecular biology, biotechnology, biomedical sciences, health, and medicine. The vastness …
Environmental modulation of global epistasis in a drug resistance fitness landscape
J Diaz-Colunga, A Sanchez… - Nature Communications, 2023 - nature.com
Interactions between mutations (epistasis) can add substantial complexity to genotype-
phenotype maps, hampering our ability to predict evolution. Yet, recent studies have shown …
phenotype maps, hampering our ability to predict evolution. Yet, recent studies have shown …
Dominance and multi-locus interaction
J Li, C Bank - Trends in Genetics, 2024 - cell.com
Dominance is usually considered a constant value that describes the relative difference in
fitness or phenotype between heterozygotes and the average of homozygotes at a focal …
fitness or phenotype between heterozygotes and the average of homozygotes at a focal …
A rugged yet easily navigable fitness landscape
Fitness landscape theory predicts that rugged landscapes with multiple peaks impair
Darwinian evolution, but experimental evidence is limited. In this study, we used genome …
Darwinian evolution, but experimental evidence is limited. In this study, we used genome …
Unpredictability of the Fitness Effects of Antimicrobial Resistance Mutations Across Environments in Escherichia coli
The evolution of antimicrobial resistance (AMR) in bacteria is a major public health concern,
and antibiotic restriction is often implemented to reduce the spread of resistance. These …
and antibiotic restriction is often implemented to reduce the spread of resistance. These …
Transient eco-evolutionary dynamics early in a phage epidemic have strong and lasting impact on the long-term evolution of bacterial defences
Organisms have evolved a range of constitutive (always active) and inducible (elicited by
parasites) defence mechanisms, but we have limited understanding of what drives the …
parasites) defence mechanisms, but we have limited understanding of what drives the …
Mutations that enhance evolvability may open doors to faster adaptation
CB Ogbunugafor - nature communications, 2023 - nature.com
Mutations that enhance evolvability may open doors to faster adaptation | Nature
Communications Skip to main content Thank you for visiting nature.com. You are using a browser …
Communications Skip to main content Thank you for visiting nature.com. You are using a browser …
Global epistasis and the emergence of function in microbial consortia
The many functions of microbial communities emerge from a complex web of interactions
between organisms and their environment. This poses a significant obstacle to engineering …
between organisms and their environment. This poses a significant obstacle to engineering …
Epistasis decreases with increasing antibiotic pressure but not temperature
Predicting mutational effects is essential for the control of antibiotic resistance (ABR).
Predictions are difficult when there are strong genotype-by-environment (G× E), gene-by …
Predictions are difficult when there are strong genotype-by-environment (G× E), gene-by …