Uncultivated microbes in need of their own taxonomy

KT Konstantinidis, R Rosselló-Móra… - The ISME journal, 2017 - academic.oup.com
The great majority of microbial species remains uncultured, severely limiting their taxonomic
characterization and thus communication among scientists. Although Candidatus was …

Biogeochemical controls on coastal hypoxia

K Fennel, JM Testa - Annual Review of Marine Science, 2019 - annualreviews.org
Aquatic environments experiencing low-oxygen conditions have been described as hypoxic,
suboxic, or anoxic zones; oxygen minimum zones; and, in the popular media, the misnomer …

Comparative Genomic Analysis of the Class Epsilonproteobacteria and Proposed Reclassification to Epsilonbacteraeota (phyl. nov.)

DW Waite, I Vanwonterghem, C Rinke… - Frontiers in …, 2017 - frontiersin.org
The Epsilonproteobacteria is the fifth validly described class of the phylum Proteobacteria,
known primarily for clinical relevance and for chemolithotrophy in various terrestrial and …

The life sulfuric: microbial ecology of sulfur cycling in marine sediments

K Wasmund, M Mußmann, A Loy - Environmental microbiology …, 2017 - Wiley Online Library
Almost the entire seafloor is covered with sediments that can be more than 10 000 m thick
and represent a vast microbial ecosystem that is a major component of Earth's element and …

Microbial ecology of the dark ocean above, at, and below the seafloor

BN Orcutt, JB Sylvan, NJ Knab… - … and molecular biology …, 2011 - Am Soc Microbiol
The majority of life on Earth—notably, microbial life—occurs in places that do not receive
sunlight, with the habitats of the oceans being the largest of these reservoirs. Sunlight …

Stronger environmental adaptation of rare rather than abundant bacterioplankton in response to dredging in eutrophic Lake Nanhu (Wuhan, China)

W Wan, HP Grossart, D He, W Yuan, Y Yang - Water Research, 2021 - Elsevier
Deciphering responses of rare versus abundant bacterioplankton to environmental change,
crucial for understanding and mitigating of cyanobacterial blooms, is an important but poorly …

Microbial ecology of expanding oxygen minimum zones

JJ Wright, KM Konwar, SJ Hallam - Nature Reviews Microbiology, 2012 - nature.com
Dissolved oxygen concentration is a crucial organizing principle in marine ecosystems. As
oxygen levels decline, energy is increasingly diverted away from higher trophic levels into …

Potential for chemolithoautotrophy among ubiquitous bacteria lineages in the dark ocean

BK Swan, M Martinez-Garcia, CM Preston, A Sczyrba… - Science, 2011 - science.org
Recent studies suggest that unidentified prokaryotes fix inorganic carbon at globally
significant rates in the immense dark ocean. Using single-cell sorting and whole-genome …

Microbial nitrogen cycling processes in oxygen minimum zones

P Lam, MMM Kuypers - Annual review of marine science, 2011 - annualreviews.org
Oxygen minimum zones (OMZs) harbor unique microbial communities that rely on
alternative electron acceptors for respiration. Conditions therein enable an almost complete …

Beyond the Calvin cycle: autotrophic carbon fixation in the ocean

M Hügler, SM Sievert - Annual review of marine science, 2011 - annualreviews.org
Organisms capable of autotrophic metabolism assimilate inorganic carbon into organic
carbon. They form an integral part of ecosystems by making an otherwise unavailable form …