The use and misuse of mathematical modeling for infectious disease policymaking: lessons for the COVID-19 pandemic

LP James, JA Salomon, CO Buckee… - Medical Decision …, 2021 - journals.sagepub.com
Mathematical modeling has played a prominent and necessary role in the current
coronavirus disease 2019 (COVID-19) pandemic, with an increasing number of models …

Genomics and epidemiology of the P. 1 SARS-CoV-2 lineage in Manaus, Brazil

NR Faria, TA Mellan, C Whittaker, IM Claro… - Science, 2021 - science.org
Cases of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection in
Manaus, Brazil, resurged in late 2020 despite previously high levels of infection. Genome …

Progress and challenges in infectious disease cartography

MUG Kraemer, SI Hay, DM Pigott, DL Smith… - Trends in …, 2016 - cell.com
Quantitatively mapping the spatial distributions of infectious diseases is key to both
investigating their epidemiology and identifying populations at risk of infection. Important …

Real-time forecasting of epidemic trajectories using computational dynamic ensembles

G Chowell, R Luo, K Sun, K Roosa, A Tariq, C Viboud - Epidemics, 2020 - Elsevier
Forecasting the trajectory of social dynamic processes, such as the spread of infectious
diseases, poses significant challenges that call for methods that account for data and model …

An ensemble n-sub-epidemic modeling framework for short-term forecasting epidemic trajectories: Application to the COVID-19 pandemic in the USA

G Chowell, S Dahal, A Tariq, K Roosa… - PLoS Computational …, 2022 - journals.plos.org
We analyze an ensemble of n-sub-epidemic modeling for forecasting the trajectory of
epidemics and pandemics. These ensemble modeling approaches, and models that …

Defining the relationship between infection prevalence and clinical incidence of Plasmodium falciparum malaria

E Cameron, KE Battle, S Bhatt, DJ Weiss… - Nature …, 2015 - nature.com
In many countries health system data remain too weak to accurately enumerate Plasmodium
falciparum malaria cases. In response, cartographic approaches have been developed that …

A surveillance of food borne disease outbreaks in India: 2009–2018

A Bisht, MP Kamble, P Choudhary, K Chaturvedi… - Food Control, 2021 - Elsevier
Abstract Knowledge about distribution of food-borne outbreaks and implicated food-vehicles
helps in mitigating the risk of food-borne diseases and is critical for designing strategies to …

[HTML][HTML] Decision-making for foot-and-mouth disease control: objectives matter

WJM Probert, K Shea, CJ Fonnesbeck, MC Runge… - Epidemics, 2016 - Elsevier
Formal decision-analytic methods can be used to frame disease control problems, the first
step of which is to define a clear and specific objective. We demonstrate the imperative of …

Trade-offs between individual and ensemble forecasts of an emerging infectious disease

RJ Oidtman, E Omodei, MUG Kraemer… - Nature …, 2021 - nature.com
Probabilistic forecasts play an indispensable role in answering questions about the spread
of newly emerged pathogens. However, uncertainties about the epidemiology of emerging …

Systematic selection between age and household structure for models aimed at emerging epidemic predictions

L Pellis, S Cauchemez, NM Ferguson… - Nature communications, 2020 - nature.com
Numerous epidemic models have been developed to capture aspects of human contact
patterns, making model selection challenging when they fit (often-scarce) early epidemic …