3′-end processing of eukaryotic mRNA: machinery, regulation, and impact on gene expression

V Boreikaitė, LA Passmore - Annual review of biochemistry, 2023 - annualreviews.org
Formation of the 3′ end of a eukaryotic mRNA is a key step in the production of a mature
transcript. This process is mediated by a number of protein factors that cleave the pre …

The nexus between RNA-binding proteins and their effectors

S He, E Valkov, S Cheloufi, J Murn - Nature Reviews Genetics, 2023 - nature.com
RNA-binding proteins (RBPs) regulate essentially every event in the lifetime of an RNA
molecule, from its production to its destruction. Whereas much has been learned about RNA …

[HTML][HTML] Single-cell quantification of ribosome occupancy in early mouse development

H Ozadam, T Tonn, CM Han, A Segura, I Hoskins… - Nature, 2023 - nature.com
Translation regulation is critical for early mammalian embryonic development. However,
previous studies had been restricted to bulk measurements, precluding precise …

[PDF][PDF] Mechanisms of readthrough mitigation reveal principles of GCN1-mediated translational quality control

MBD Müller, P Kasturi, GG Jayaraj, FU Hartl - Cell, 2023 - cell.com
Readthrough into the 3′ untranslated region (3′ UTR) of the mRNA results in the
production of aberrant proteins. Metazoans efficiently clear readthrough proteins, but the …

[PDF][PDF] Codon optimality-mediated mRNA degradation: Linking translational elongation to mRNA stability

H Bae, J Coller - Molecular cell, 2022 - cell.com
Messenger RNA (mRNA) translation by the ribosome represents the final step of a
complicated molecular dance from DNA to protein. Although classically considered a …

[HTML][HTML] Single-molecule epitranscriptomic analysis of full-length HIV-1 RNAs reveals functional roles of site-specific m6As

A Baek, GE Lee, S Golconda, A Rayhan… - Nature …, 2024 - nature.com
Although the significance of chemical modifications on RNA is acknowledged, the
evolutionary benefits and specific roles in human immunodeficiency virus (HIV-1) replication …

[PDF][PDF] Deadenylase-dependent mRNA decay of GDF15 and FGF21 orchestrates food intake and energy expenditure

S Katsumura, N Siddiqui, MR Goldsmith, JH Cheah… - Cell metabolism, 2022 - cell.com
Hepatokines, secretory proteins from the liver, mediate inter-organ communication to
maintain a metabolic balance between food intake and energy expenditure. However …

Advancements of in vitro transcribed mRNA (IVT mRNA) to enable translation into the clinics

DD Kang, H Li, Y Dong - Advanced Drug Delivery Reviews, 2023 - Elsevier
The accelerated progress and approval of two mRNA-based vaccines to address the SARS-
CoV-2 virus were unprecedented. This record-setting feat was made possible through the …

[HTML][HTML] mRNA in the context of protein replacement therapy

T Vavilis, E Stamoula, A Ainatzoglou, A Sachinidis… - Pharmaceutics, 2023 - mdpi.com
Protein replacement therapy is an umbrella term used for medical treatments that aim to
substitute or replenish specific protein deficiencies that result either from the protein being …

An atlas of plant full-length RNA reveals tissue-specific and monocots–dicots conserved regulation of poly (A) tail length

J Jia, W Lu, B Liu, H Fang, Y Yu, W Mo, H Zhang, X Jin… - Nature Plants, 2022 - nature.com
Poly (A) tail is a hallmark of eukaryotic messenger RNA and its length plays an essential role
in regulating mRNA metabolism. However, a comprehensive resource for plant poly (A) tail …