A facile method for the removal of dsRNA contaminant from in vitro-transcribed mRNA

M Baiersdörfer, G Boros, H Muramatsu… - … Therapy-Nucleic Acids, 2019 - cell.com
The increasing importance of in vitro-transcribed (IVT) mRNA for synthesizing the encoded
therapeutic protein in vivo demands the manufacturing of pure mRNA products. The major …

Natural antisense transcripts as versatile regulators of gene expression

A Werner, A Kanhere, C Wahlestedt… - Nature Reviews …, 2024 - nature.com
Long non-coding RNAs (lncRNAs) are emerging as a major class of gene products that
have central roles in cell and developmental biology. Natural antisense transcripts (NATs) …

[PDF][PDF] Biological functions of natural antisense transcripts

W Rosikiewicz, I Makałowska - Acta Biochimica Polonica, 2016 - frontierspartnerships.org
Natural antisense transcripts (NATs) are RNA molecules that originate from opposite DNA
strands of the same genomic locus (cis-NAT) or unlinked genomic loci (trans-NAT). NATs …

High-throughput sequencing of human plasma RNA by using thermostable group II intron reverse transcriptases

Y Qin, J Yao, DC Wu, RM Nottingham, S Mohr… - Rna, 2016 - rnajournal.cshlp.org
Next-generation RNA-sequencing (RNA-seq) has revolutionized transcriptome profiling,
gene expression analysis, and RNA-based diagnostics. Here, we developed a new RNA …

Targeting DDX3X triggers antitumor immunity via a dsRNA-mediated tumor-intrinsic type I interferon response

H Choi, J Kwon, MS Cho, Y Sun, X Zheng, J Wang… - Cancer research, 2021 - AACR
Induction of nucleic acid sensing–mediated type I interferon (IFN) has emerged as a novel
approach to activate the immune system against cancer. Here we show that the depletion of …

Kinetic discrimination of self/non-self RNA by the ATPase activity of RIG-I and MDA5

J Louber, J Brunel, E Uchikawa, S Cusack, D Gerlier - BMC biology, 2015 - Springer
Background The cytoplasmic RIG-like receptors are responsible for the early detection of
viruses and other intracellular microbes by activating the innate immune response mediated …

Computational analysis of sense-antisense chimeric transcripts reveals their potential regulatory features and the landscape of expression in human cells

S Mukherjee, R Detroja, D Balamurali… - NAR Genomics and …, 2021 - academic.oup.com
Many human genes are transcribed from both strands and produce sense-antisense gene
pairs. Sense-antisense (SAS) chimeric transcripts are produced upon the coalescing of …

Intracellular RNA sensing in mammalian cells: role in stress response and cancer therapies

NN Khodarev - International review of cell and molecular biology, 2019 - Elsevier
DNA damage has been considered the primary action of ionizing radiation (IR) in normal
and tumor cells resulting in cell autonomous death. However, recent findings have …

Endogenous double-stranded Alu RNA elements stimulate IFN-responses in relapsing remitting multiple sclerosis

MJ Heinrich, CA Purcell, AJ Pruijssers, Y Zhao… - Journal of …, 2019 - Elsevier
Various sensors that detect double-stranded RNA, presumably of viral origin, exist in
eukaryotic cells and induce IFN-responses. Ongoing IFN-responses have also been …

Discrimination of self and non-self ribonucleic acids

A Gebhardt, BT Laudenbach… - Journal of interferon & …, 2017 - liebertpub.com
Most virus infections are controlled through the innate and adaptive immune system. A
surprisingly limited number of so-called pattern recognition receptors (PRRs) have the ability …