The SARS coronavirus nucleocapsid protein–forms and functions

C Chang, MH Hou, CF Chang, CD Hsiao, T Huang - Antiviral research, 2014 - Elsevier
The nucleocapsid phosphoprotein of the severe acute respiratory syndrome coronavirus
(SARS-CoV N protein) packages the viral genome into a helical ribonucleocapsid (RNP) …

Mass spectrometry of nucleic acid noncovalent complexes

E Largy, A Konig, A Ghosh, D Ghosh… - Chemical …, 2021 - ACS Publications
Nucleic acids have been among the first targets for antitumor drugs and antibiotics. With the
unveiling of new biological roles in regulation of gene expression, specific DNA and RNA …

[图书][B] Nucleic acids in chemistry and biology

GM Blackburn - 2006 - books.google.com
The structure, function and reactions of nucleic acids are central to molecular biology and
are crucial for the understanding of complex biological processes involved. Revised and …

The Poisson–Boltzmann equation for biomolecular electrostatics: a tool for structural biology

F Fogolari, A Brigo, H Molinari - Journal of Molecular …, 2002 - Wiley Online Library
Electrostatics plays a fundamental role in virtually all processes involving biomolecules in
solution. The Poisson–Boltzmann equation constitutes one of the most fundamental …

RNA recognition by double-stranded RNA binding domains: a matter of shape and sequence

G Masliah, P Barraud, FHT Allain - Cellular and molecular life sciences, 2013 - Springer
The double-stranded RNA binding domain (dsRBD) is a small protein domain of 65–70
amino acids adopting an αβββα fold, whose central property is to bind to double-stranded …

Protein–RNA interactions: a structural analysis

S Jones, DTA Daley, NM Luscombe… - Nucleic acids …, 2001 - academic.oup.com
A detailed computational analysis of 32 protein–RNA complexes is presented. A number of
physical and chemical properties of the intermolecular interfaces are calculated and …

BindN: a web-based tool for efficient prediction of DNA and RNA binding sites in amino acid sequences

L Wang, SJ Brown - Nucleic acids research, 2006 - academic.oup.com
Abstract BindN (http://bioinformatics. ksu. edu/bindn/) takes an amino acid sequence as
input and predicts potential DNA or RNA-binding residues with support vector machines …

PROFEAT: a web server for computing structural and physicochemical features of proteins and peptides from amino acid sequence

ZR Li, HH Lin, LY Han, L Jiang, X Chen… - Nucleic acids …, 2006 - academic.oup.com
Sequence-derived structural and physicochemical features have frequently been used in the
development of statistical learning models for predicting proteins and peptides of different …

Structure of the N-terminal RNA-binding domain of the SARS CoV nucleocapsid protein

Q Huang, L Yu, AM Petros, A Gunasekera, Z Liu… - Biochemistry, 2004 - ACS Publications
The severe acute respiratory syndrome (SARS) virus belongs to the Coronaviridea family of
viruses. Its virion encodes several proteins including a replicase and four structural proteins …

Structure of dual function iron regulatory protein 1 complexed with ferritin IRE-RNA

WE Walden, AI Selezneva, J Dupuy, A Volbeda… - Science, 2006 - science.org
Iron regulatory protein 1 (IRP1) binds iron-responsive elements (IREs) in messenger RNAs
(mRNAs), to repress translation or degradation, or binds an iron-sulfur cluster, to become a …