Evolution of gene duplication in plants

N Panchy, M Lehti-Shiu, SH Shiu - Plant physiology, 2016 - academic.oup.com
Ancient duplication events and a high rate of retention of extant pairs of duplicate genes
have contributed to an abundance of duplicate genes in plant genomes. These duplicates …

Polyploidy and its effect on evolutionary success: old questions revisited with new tools

A Madlung - Heredity, 2013 - nature.com
Polyploidy, the condition of possessing more than two complete genomes in a cell, has
intrigued biologists for almost a century. Polyploidy is found in many plants and some animal …

A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome

International Wheat Genome Sequencing Consortium … - Science, 2014 - science.org
An ordered draft sequence of the 17-gigabase hexaploid bread wheat (Triticum aestivum)
genome has been produced by sequencing isolated chromosome arms. We have annotated …

Polyploidy, the nucleotype, and novelty: the impact of genome doubling on the biology of the cell

JJ Doyle, JE Coate - International Journal of Plant Sciences, 2019 - journals.uchicago.edu
Polyploidy is a key mechanism of genome evolution and speciation, particularly in plants.
Many aspects of polyploidy have been elucidated with the tools that have become available …

A pan-grass transcriptome reveals patterns of cellular divergence in crops

B Guillotin, R Rahni, M Passalacqua, MA Mohammed… - Nature, 2023 - nature.com
Different plant species within the grasses were parallel targets of domestication, giving rise
to crops with distinct evolutionary histories and traits. Key traits that distinguish these species …

Polyploidy: pitfalls and paths to a paradigm

DE Soltis, CJ Visger, DB Marchant… - American journal of …, 2016 - Wiley Online Library
Investigators have long searched for a polyploidy paradigm—rules or principles that might
be common following polyploidization (whole‐genome duplication, WGD). Here we attempt …

Gene duplication and evolutionary novelty in plants

LE Flagel, JF Wendel - New Phytologist, 2009 - Wiley Online Library
Duplication is a prominent feature of plant genomic architecture. This has led many
researchers to speculate that gene duplication may have played an important role in the …

Homoeolog expression bias and expression level dominance in allopolyploid cotton

MJ Yoo, E Szadkowski, JF Wendel - Heredity, 2013 - nature.com
Allopolyploidy is an evolutionary and mechanistically intriguing process, in that it entails the
reconciliation of two or more sets of diverged genomes and regulatory interactions. In this …

Genome interplay in the grain transcriptome of hexaploid bread wheat

M Pfeifer, KG Kugler, SR Sandve, B Zhan, H Rudi… - Science, 2014 - science.org
Allohexaploid bread wheat (Triticum aestivum L.) provides approximately 20% of calories
consumed by humans. Lack of genome sequence for the three homeologous and highly …

Genome evolution due to allopolyploidization in wheat

M Feldman, AA Levy - Genetics, 2012 - academic.oup.com
The wheat group has evolved through allopolyploidization, namely, through hybridization
among species from the plant genera Aegilops and Triticum followed by genome doubling …