There and back again; historical perspective and future directions for Vaccinium breeding and research studies
Abstract The genus Vaccinium L.(Ericaceae) contains a wide diversity of culturally and
economically important berry crop species. Consumer demand and scientific research in …
economically important berry crop species. Consumer demand and scientific research in …
[HTML][HTML] Population genomic analysis of Aegilops tauschii identifies targets for bread wheat improvement
Aegilops tauschii, the diploid wild progenitor of the D subgenome of bread wheat, is a
reservoir of genetic diversity for improving bread wheat performance and environmental …
reservoir of genetic diversity for improving bread wheat performance and environmental …
[HTML][HTML] LightGBM: accelerated genomically designed crop breeding through ensemble learning
LightGBM is an ensemble model of decision trees for classification and regression
prediction. We demonstrate its utility in genomic selection-assisted breeding with a large …
prediction. We demonstrate its utility in genomic selection-assisted breeding with a large …
[HTML][HTML] Structure and function of rice hybrid genomes reveal genetic basis and optimal performance of heterosis
Z Gu, J Gong, Z Zhu, Z Li, Q Feng, C Wang, Y Zhao… - Nature Genetics, 2023 - nature.com
Exploitation of crop heterosis is crucial for increasing global agriculture production.
However, the quantitative genomic analysis of heterosis was lacking, and there is currently …
However, the quantitative genomic analysis of heterosis was lacking, and there is currently …
[HTML][HTML] The genetic mechanism of heterosis utilization in maize improvement
Background In maize hybrid breeding, complementary pools of parental lines with reshuffled
genetic variants are established for superior hybrid performance. To comprehensively …
genetic variants are established for superior hybrid performance. To comprehensively …
AlphaSimR: an R package for breeding program simulations
This paper introduces AlphaSimR, an R package for stochastic simulations of plant and
animal breeding programs. AlphaSimR is a highly flexible software package able to simulate …
animal breeding programs. AlphaSimR is a highly flexible software package able to simulate …
[HTML][HTML] Genome-wide association analyses identify QTL hotspots for yield and component traits in durum wheat grown under yield potential, drought, and heat stress …
S Sukumaran, MP Reynolds, C Sansaloni - Frontiers in plant science, 2018 - frontiersin.org
Understanding the genetic bases of economically important traits is fundamentally important
in enhancing genetic gains in durum wheat. In this study, a durum panel of 208 lines …
in enhancing genetic gains in durum wheat. In this study, a durum panel of 208 lines …
[HTML][HTML] Optimizing genomic-enabled prediction in small-scale maize hybrid breeding programs: a roadmap review
R Fritsche-Neto, G Galli, KLR Borges… - Frontiers in Plant …, 2021 - frontiersin.org
The usefulness of genomic prediction (GP) for many animal and plant breeding programs
has been highlighted for many studies in the last 20 years. In maize breeding programs …
has been highlighted for many studies in the last 20 years. In maize breeding programs …
Genome wide association study reveals plant loci controlling heritability of the rhizosphere microbiome
Host genetics has recently been shown to be a driver of plant microbiome composition.
However, identifying the underlying genetic loci controlling microbial selection remains …
However, identifying the underlying genetic loci controlling microbial selection remains …
HIBLUP: an integration of statistical models on the BLUP framework for efficient genetic evaluation using big genomic data
Human diseases and agricultural traits can be predicted by modeling a genetic random
polygenic effect in linear mixed models. To estimate variance components and predict …
polygenic effect in linear mixed models. To estimate variance components and predict …