Dynamic alternative DNA structures in biology and disease

G Wang, KM Vasquez - Nature Reviews Genetics, 2023 - nature.com
Repetitive elements in the human genome, once considered 'junk DNA', are now known to
adopt more than a dozen alternative (that is, non-B) DNA structures, such as self-annealed …

DNA damage response in cancer therapy and resistance: challenges and opportunities

D Jurkovicova, CM Neophytou, AČ Gašparović… - International Journal of …, 2022 - mdpi.com
Resistance to chemo-and radiotherapy is a common event among cancer patients and a
reason why new cancer therapies and therapeutic strategies need to be in continuous …

Oxidative DNA damage is epigenetic by regulating gene transcription via base excision repair

AM Fleming, Y Ding… - Proceedings of the …, 2017 - National Acad Sciences
Reactive oxygen species (ROS) have emerged as important cellular-signaling agents for
cellular survival. Herein, we demonstrate that ROS-mediated oxidation of DNA to yield 8-oxo …

Formation and repair of oxidatively generated damage in cellular DNA

J Cadet, KJA Davies, MHG Medeiros… - Free Radical Biology …, 2017 - Elsevier
In this review article, emphasis is placed on the critical survey of available data concerning
modified nucleobase and 2-deoxyribose products that have been identified in cellular DNA …

[HTML][HTML] 8-Oxoguanine DNA glycosylase 1: Beyond repair of the oxidatively modified base lesions

X Ba, I Boldogh - Redox biology, 2018 - Elsevier
Oxidative stress and the resulting damage to genomic DNA are inevitable consequences of
endogenous physiological processes, and they are amplified by cellular responses to …

Interplay of guanine oxidation and G-quadruplex folding in gene promoters

AM Fleming, CJ Burrows - Journal of the American Chemical …, 2019 - ACS Publications
Living in an oxygen atmosphere demands an ability to thrive in the presence of reactive
oxygen species (ROS). Aerobic organisms have successfully found solutions to the oxidative …

The involvement of nucleotide excision repair proteins in the removal of oxidative DNA damage

N Kumar, S Raja, B Van Houten - Nucleic acids research, 2020 - academic.oup.com
The six major mammalian DNA repair pathways were discovered as independent
processes, each dedicated to remove specific types of lesions, but the past two decades …

[HTML][HTML] Not breathing is not an option: How to deal with oxidative DNA damage

E Markkanen - DNA repair, 2017 - Elsevier
Oxidative DNA damage constitutes a major threat to genetic integrity, and has thus been
implicated in the pathogenesis of a wide variety of diseases, including cancer and …

Occurrence, biological consequences, and human health relevance of oxidative stress-induced DNA damage

Y Yu, Y Cui, LJ Niedernhofer… - Chemical research in …, 2016 - ACS Publications
A variety of endogenous and exogenous agents can induce DNA damage and lead to
genomic instability. Reactive oxygen species (ROS), an important class of DNA damaging …

On the irrelevancy of hydroxyl radical to DNA damage from oxidative stress and implications for epigenetics

AM Fleming, CJ Burrows - Chemical Society Reviews, 2020 - pubs.rsc.org
Contrary to frequent reports in the literature, hydroxyl radical is not a key species
participating in endogenous oxidative DNA damage. Instead, carbonate radical anion is …