In-cell structural biology by NMR: the benefits of the atomic scale

FX Theillet - Chemical reviews, 2022 - ACS Publications
In-cell structural biology aims at extracting structural information about proteins or nucleic
acids in their native, cellular environment. This emerging field holds great promise and is …

Synthetic biology—the synthesis of biology

S Ausländer, D Ausländer… - Angewandte Chemie …, 2017 - Wiley Online Library
Synthetic biology concerns the engineering of man‐made living biomachines from
standardized components that can perform predefined functions in a (self‐) controlled …

Acoustic reporter genes for noninvasive imaging of microorganisms in mammalian hosts

RW Bourdeau, A Lee-Gosselin, A Lakshmanan… - Nature, 2018 - nature.com
The mammalian microbiome has many important roles in health and disease,, and genetic
engineering is enabling the development of microbial therapeutics and diagnostics,,,,. A key …

Burden-driven feedback control of gene expression

F Ceroni, A Boo, S Furini, TE Gorochowski… - Nature …, 2018 - nature.com
Cells use feedback regulation to ensure robust growth despite fluctuating demands for
resources and differing environmental conditions. However, the expression of foreign …

Genomically mined acoustic reporter genes for real-time in vivo monitoring of tumors and tumor-homing bacteria

RC Hurt, MT Buss, M Duan, K Wong, MY You… - Nature …, 2023 - nature.com
Ultrasound allows imaging at a much greater depth than optical methods, but existing
genetically encoded acoustic reporters for in vivo cellular imaging have been limited by poor …

Characterization and mitigation of gene expression burden in mammalian cells

T Frei, F Cella, F Tedeschi, J Gutiérrez, GB Stan… - Nature …, 2020 - nature.com
Despite recent advances in circuit engineering, the design of genetic networks in
mammalian cells is still painstakingly slow and fraught with inexplicable failures. Here, we …

Diverse genetic error modes constrain large-scale bio-based production

P Rugbjerg, N Myling-Petersen, A Porse… - Nature …, 2018 - nature.com
A transition toward sustainable bio-based chemical production is important for green growth.
However, productivity and yield frequently decrease as large-scale microbial fermentation …

Stress-driven dynamic regulation of multiple tolerance genes improves robustness and productive capacity of Saccharomyces cerevisiae in industrial lignocellulose …

L Qin, S Dong, J Yu, X Ning, K Xu, SJ Zhang, L Xu… - Metabolic …, 2020 - Elsevier
Yeast productivity in lignocellulosic ethanol fermentation is clearly impeded by stress.
Enhancing the robustness of xylose-fermenting yeast is important for improving …

Designing biological circuits: synthetic biology within the operon model and beyond

MA English, RV Gayet, JJ Collins - Annual Review of …, 2021 - annualreviews.org
In 1961, Jacob and Monod proposed the operon model of gene regulation. At the model's
core was the modular assembly of regulators, operators, and structural genes. To illustrate …

Synthetic addiction extends the productive life time of engineered Escherichia coli populations

P Rugbjerg, K Sarup-Lytzen, M Nagy… - Proceedings of the …, 2018 - National Acad Sciences
Bio-production of chemicals is an important driver of the societal transition toward
sustainability. However, fermentations with heavily engineered production organisms can be …