Starships: a new frontier for fungal biology
Transposable elements (TEs) are semiautonomous genetic entities that proliferate in
genomes. We recently discovered the Starships, a previously hidden superfamily of giant …
genomes. We recently discovered the Starships, a previously hidden superfamily of giant …
Recent reactivation of a pathogenicity-associated transposable element is associated with major chromosomal rearrangements in a fungal wheat pathogen
Transposable elements (TEs) are key drivers of genomic variation contributing to recent
adaptation in most species. Yet, the evolutionary origins and insertion dynamics within …
adaptation in most species. Yet, the evolutionary origins and insertion dynamics within …
[HTML][HTML] Genome-wide expression QTL mapping reveals the highly dynamic regulatory landscape of a major wheat pathogen
LN Abraham, D Croll - BMC biology, 2023 - Springer
Background In agricultural ecosystems, outbreaks of diseases are frequent and pose a
significant threat to food security. A successful pathogen undergoes a complex and well …
significant threat to food security. A successful pathogen undergoes a complex and well …
Systematic identification of cargo-mobilizing genetic elements reveals new dimensions of eukaryotic diversity
E Gluck-Thaler, AA Vogan - Nucleic Acids Research, 2024 - academic.oup.com
Cargo-mobilizing mobile elements (CMEs) are genetic entities that faithfully transpose
diverse protein coding sequences. Although common in bacteria, we know little about …
diverse protein coding sequences. Although common in bacteria, we know little about …
[HTML][HTML] The genomic landscape of transposable elements in yeast hybrids is shaped by structural variation and genotype-specific modulation of transposition rate
Transposable elements (TEs) are major contributors to structural genomic variation by
creating interspersed duplications of themselves. In return, structural variants (SVs) can …
creating interspersed duplications of themselves. In return, structural variants (SVs) can …
Transposable elements impact the population divergence of rice blast fungus Magnaporthe oryzae
L Lin, T Sun, J Guo, L Lin, M Chen, Z Wang, J Bao… - Mbio, 2024 - Am Soc Microbiol
Dynamic transposition of transposable elements (TEs) in fungal pathogens has significant
impact on genome stability, gene expression, and virulence to the host. In Magnaporthe …
impact on genome stability, gene expression, and virulence to the host. In Magnaporthe …
[HTML][HTML] Evolutionary dynamics of the LTR-retrotransposon crapaud in the Podospora anserina species complex and the interaction with repeat-induced point …
Background The genome of the filamentous ascomycete Podospora anserina shows a
relatively high abundance of retrotransposons compared to other interspersed repeats. The …
relatively high abundance of retrotransposons compared to other interspersed repeats. The …
Strain-specific evolution and host-specific regulation of transposable elements in the model plant symbiont Rhizophagus irregularis
JIN Oliveira, N Corradi - G3: Genes, Genomes, Genetics, 2024 - academic.oup.com
Transposable elements (TEs) are repetitive DNA that can create genome structure and
regulation variability. The genome of Rhizophagus irregularis, a widely studied arbuscular …
regulation variability. The genome of Rhizophagus irregularis, a widely studied arbuscular …
Population-level transposable element expression dynamics influence trait evolution in a fungal crop pathogen
The rapid adaptive evolution of microbes is driven by strong selection pressure acting on
genetic variation. How adaptive genetic variation is generated within species and how such …
genetic variation. How adaptive genetic variation is generated within species and how such …
Systematic identification of cargo-carrying genetic elements reveals new dimensions of eukaryotic diversity
E Gluck-Thaler, AA Vogan - bioRxiv, 2023 - biorxiv.org
Cargo-carrying mobile elements (CCEs) are genetic entities that transpose diverse protein
coding sequences. Although common in bacteria, we know little about the biology of …
coding sequences. Although common in bacteria, we know little about the biology of …