Target capture and genome skimming for plant diversity studies

FF Pezzini, G Ferrari, LL Forrest, ML Hart… - Applications in Plant …, 2023 - Wiley Online Library
Recent technological advances in long‐read high‐throughput sequencing and assembly
methods have facilitated the generation of annotated chromosome‐scale whole‐genome …

[HTML][HTML] Phylogenetic studies of magnoliids: Advances and perspectives

Z Shen, X Ding, J Cheng, F Wu, H Yin… - Frontiers in Plant …, 2023 - frontiersin.org
Magnoliids are the largest flowering plant clades outside eudicots and monocots, which are
distributed all over the world and have high economic and ornamental value. Eudicots …

[HTML][HTML] A plastid phylogenomic framework for the palm family (Arecaceae)

G Yao, YQ Zhang, C Barrett, B Xue, S Bellot… - BMC …, 2023 - bmcbiol.biomedcentral.com
Over the past decade, phylogenomics has greatly advanced our knowledge of angiosperm
evolution. However, phylogenomic studies of large angiosperm families with complete …

[HTML][HTML] Characteristics of plastid genomes in the genus Ceratostigma inhabiting arid habitats in China and their phylogenomic implications

YJ Zhao, J Liu, GS Yin, X Gong - BMC Plant …, 2023 - bmcplantbiol.biomedcentral.com
Ceratostigma, a genus in the Plumbaginaceae, is an ecologically dominant group of shrubs,
subshrub and herb mainly distributed in Qinghai-Tibet Plateau and North China …

[HTML][HTML] Phylogeny of Leontopodium (Asteraceae) in China—with a reference to plastid genome and nuclear ribosomal DNA

XM Xu, Z Wei, JZ Sun, QF Zhao, Y Lu… - Frontiers in Plant …, 2023 - ncbi.nlm.nih.gov
The infrageneric taxonomy system, species delimitation, and interspecies systematic
relationships of Leontopodium remain controversial and complex. However, only a few …

Genome‐scale angiosperm phylogenies based on nuclear, plastome, and mitochondrial datasets

H Hu, P Sun, Y Yang, J Ma, J Liu - Journal of Integrative Plant …, 2023 - Wiley Online Library
Angiosperms dominate the Earth's ecosystems and provide most of the basic necessities for
human life. The major angiosperm clades comprise 64 orders, as recognized by the APG IV …

[HTML][HTML] Phylogenetic Relationships and Next-Generation Barcodes in the Genus Torreya Reveal a High Proportion of Misidentified Cultivated Plants

ZQ Mo, J Wang, M Möller, JB Yang, LM Gao - International Journal of …, 2023 - mdpi.com
Accurate species identification is key to conservation and phylogenetic inference. Living
plant collections from botanical gardens/arboretum are important resources for the purpose …

Multiple paternally inherited chloroplast capture events associated with Taxus speciation in the Hengduan Mountains

HT Qin, M Mller, R Milne, YH Luo, GF Zhu, DZ Li… - Molecular phylogenetics …, 2023 - Elsevier
Mountainous regions provide a multitude of habitats and opportunities for complex
speciation scenarios. Hybridization leading to chloroplast capture, which can be revealed by …

[HTML][HTML] Deep genome skimming reveals the hybrid origin of Pseudosasa gracilis (Poaceae: Bambusoideae)

XZ Hu, C Guo, SY Qin, DZ Li, ZH Guo - Plant Diversity, 2023 - Elsevier
Abstract Pseudosasa gracilis (Poaceae: Bambusoideae) is a temperate woody bamboo
species endemic to South-central China with a narrow distribution. Previous phylogenetic …

Complete chloroplast genomes of four Atalantia (Rutaceae) species: insights into comparative analysis, phylogenetic relationships, and divergence time estimation

W Shi, W Song, Y Zhao, C Shi, S Wang - Plant Systematics and Evolution, 2023 - Springer
Atalantia plants are small trees in the family Rutaceae that have great potential for use in
agriculture, medicine, and carving. However, the phylogenetic relationships of Atalantia …