Targeted in situ cross-linking mass spectrometry and integrative modeling reveal the architectures of three proteins from SARS-CoV-2

M Slavin, J Zamel, K Zohar, T Eliyahu… - Proceedings of the …, 2021 - National Acad Sciences
Atomic structures of several proteins from the coronavirus family are still partial or
unavailable. A possible reason for this gap is the instability of these proteins outside of the …

[HTML][HTML] Liquid-liquid phase separation of nucleocapsid proteins during SARS-CoV-2 and HIV-1 replication

BA Chau, V Chen, AW Cochrane, LJ Parent… - Cell Reports, 2023 - cell.com
The leap of retroviruses and coronaviruses from animal hosts to humans has led to two
ongoing pandemics and tens of millions of deaths worldwide. Retrovirus and coronavirus …

LINE1-mediated reverse transcription and genomic integration of SARS-CoV-2 mRNA detected in virus-infected but not in viral mRNA-transfected cells

L Zhang, P Bisht, A Flamier, MI Barrasa, M Friesen… - Viruses, 2023 - mdpi.com
SARS-CoV-2 sequences can be reverse-transcribed and integrated into the genomes of
virus-infected cells by a LINE1-mediated retrotransposition mechanism. Whole-genome …

COVID-19 Biogenesis and Intracellular Transport

AA Mironov, MA Savin, GV Beznoussenko - International journal of …, 2023 - mdpi.com
SARS-CoV-2 is responsible for the COVID-19 pandemic. The structure of SARS-CoV-2 and
most of its proteins of have been deciphered. SARS-CoV-2 enters cells through the …

SARS‐CoV‐2 biology and variants: anticipation of viral evolution and what needs to be done

R Luo, A Delaunay‐Moisan, K Timmis… - Environmental …, 2021 - Wiley Online Library
The global propagation of SARS‐CoV‐2 and the detection of a large number of variants,
some of which have replaced the original clade to become dominant, underscores the fact …

Distinct motifs in the E protein are required for SARS-CoV-2 virus particle formation and lysosomal deacidification in host cells

K Miura, Y Suzuki, K Ishida, M Arakawa, H Wu… - Journal of …, 2023 - Am Soc Microbiol
Severe acute respiratory syndrome-coronavirus-2 (SARS-CoV-2) is a major public health
concern, but the mechanisms underlying its viral particle formation are not well understood …

[HTML][HTML] Profiling B cell immunodominance after SARS-CoV-2 infection reveals antibody evolution to non-neutralizing viral targets

HL Dugan, CT Stamper, L Li, S Changrob, NW Asby… - Immunity, 2021 - cell.com
Dissecting the evolution of memory B cells (MBCs) against SARS-CoV-2 is critical for
understanding antibody recall upon secondary exposure. Here, we used single-cell …

A 3D structural SARS-CoV-2–human interactome to explore genetic and drug perturbations

SD Wierbowski, S Liang, Y Liu, Y Chen, S Gupta… - Nature …, 2021 - nature.com
Emergence of new viral agents is driven by evolution of interactions between viral proteins
and host targets. For instance, increased infectivity of SARS-CoV-2 compared to SARS-CoV …

Nucleocapsid (N) gene mutations of SARS-CoV-2 can affect real-time RT-PCR diagnostic and impact false-negative results

JCC Lesbon, MD Poleti, EC de Mattos Oliveira… - Viruses, 2021 - mdpi.com
The current COVID-19 pandemic demands massive testing by Real-time RT-PCR (Reverse
Transcription Polymerase Chain Reaction), which is considered the gold standard …

Pro-viral and anti-viral roles of the RNA-binding protein G3BP1

AK Jayabalan, DE Griffin, AKL Leung - Viruses, 2023 - mdpi.com
Viruses depend on host cellular resources to replicate. Interaction between viral and host
proteins is essential for the pathogens to ward off immune responses as well as for virus …