A thousand-genome panel retraces the global spread and adaptation of a major fungal crop pathogen

A Feurtey, C Lorrain, MC McDonald, A Milgate… - Nature …, 2023 - nature.com
Human activity impacts the evolutionary trajectories of many species worldwide. Global
trade of agricultural goods contributes to the dispersal of pathogens reshaping their genetic …

The pangenome of the wheat pathogen Pyrenophora tritici-repentis reveals novel transposons associated with necrotrophic effectors ToxA and ToxB

R Gourlie, M McDonald, M Hafez, R Ortega-Polo… - BMC biology, 2022 - Springer
Background In fungal plant pathogens, genome rearrangements followed by selection
pressure for adaptive traits have facilitated the co-evolutionary arms race between hosts and …

Recent transposable element bursts are associated with the proximity to genes in a fungal plant pathogen

U Oggenfuss, D Croll - PLoS Pathogens, 2023 - journals.plos.org
The activity of transposable elements (TEs) contributes significantly to pathogen genome
evolution. TEs often destabilize genome integrity but may also confer adaptive variation in …

Major proliferation of transposable elements shaped the genome of the soybean rust pathogen Phakopsora pachyrhizi

YK Gupta, FC Marcelino-Guimarães, C Lorrain… - Nature …, 2023 - nature.com
With> 7000 species the order of rust fungi has a disproportionately large impact on
agriculture, horticulture, forestry and foreign ecosystems. The infectious spores are typically …

Natural variation in Avr3D1 from Zymoseptoria sp. contributes to quantitative gene‐for‐gene resistance and to host specificity

L Meile, M Garrido‐Arandia, Z Bernasconi… - New …, 2023 - Wiley Online Library
Successful host colonization by plant pathogens requires the circumvention of host defense
responses, frequently through sequence modifications in secreted pathogen proteins known …

[PDF][PDF] Transposable Elements Contribute to Genome Dynamics and Gene Expression Variation in the Fungal Plant Pathogen Verticillium dahliae

DE Torres, BPHJ Thomma… - Genome Biology and …, 2021 - academic.oup.com
Transposable elements (TEs) are a major source of genetic and regulatory variation in their
host genome and are consequently thought to play important roles in evolution. Many fungal …

Recent reactivation of a pathogenicity-associated transposable element is associated with major chromosomal rearrangements in a fungal wheat pathogen

T Badet, SM Tralamazza, A Feurtey… - Nucleic Acids …, 2024 - academic.oup.com
Transposable elements (TEs) are key drivers of genomic variation contributing to recent
adaptation in most species. Yet, the evolutionary origins and insertion dynamics within …

[HTML][HTML] Epiphytic proliferation of Zymoseptoria tritici isolates on resistant wheat leaves

HN Fones, D Soanes, SJ Gurr - Fungal Genetics and Biology, 2023 - Elsevier
The wheat pathogen Zymoseptoria tritici is capable of a long period of pre-invasive epiphytic
growth. Studies have shown that virulent isolates vary in the extent, duration and growth …

Austropuccinia psidii, causing myrtle rust, has a gigabase-sized genome shaped by transposable elements

PA Tobias, B Schwessinger, CH Deng, C Wu, C Dong… - G3, 2021 - academic.oup.com
Austropuccinia psidii, originating in South America, is a globally invasive fungal plant
pathogen that causes rust disease on Myrtaceae. Several biotypes are recognized, with the …

Chromosome-level analysis of the Colletotrichum graminicola genome reveals the unique characteristics of core and minichromosomes

S Becerra, R Baroncelli, TR Boufleur… - Frontiers in …, 2023 - frontiersin.org
The fungal pathogen Colletotrichum graminicola causes the anthracnose of maize (Zea
mays) and is responsible for significant yield losses worldwide. The genome of C …