Comparative analysis of genome-wide DNA methylation in Neurospora

S Hosseini, C Meunier, D Nguyen, J Reimegård… - Epigenetics, 2020 - Taylor & Francis
ABSTRACT DNA methylation is an epigenetic mark that plays an important role in genetic
regulation in eukaryotes. Major progress has been made in dissecting the molecular …

Chromatin-immunoprecipitation reveals the PnPf2 transcriptional network controlling effector-mediated virulence in a fungal pathogen of wheat

E John, KB Singh, RP Oliver, JL Soyer… - BioRxiv, 2022 - biorxiv.org
The regulation of virulence in plant-pathogenic fungi has emerged as a key area of
importance underlying host infections. Recent work has highlighted the role of transcription …

[HTML][HTML] DNA methylation on C5-Cytosine and N6-Adenine in the Bursaphelenchus xylophilus genome

Z Liu, Y Li, X Zhang - BMC genomics, 2023 - Springer
Background The pinewood nematode is the causal agent of the pine wilt disease, which
causes severe ecological and economic losses in coniferous forests. The invasion of pine …

DNA methylation enables recurrent endogenization of giant viruses in an animal relative

LA Sarre, IV Kim, V Ovchinnikov, M Olivetta, H Suga… - bioRxiv, 2024 - biorxiv.org
5-methylcytosine (5mC) is a widespread silencing mechanism that controls genomic
parasites. However, in many eukaryotes 5mC has gained complex roles in gene regulation …

Network‐based visualisation reveals new insights into transposable element diversity

L Schneider, YK Guo, D Birch… - Molecular Systems …, 2021 - embopress.org
Transposable elements (TEs) are widespread across eukaryotic genomes, yet their content
varies widely between different species. Factors shaping the diversity of TEs are poorly …

The role of non-genetic information in evolutionary frameworks

KL Moran, Y Shlyakhtina, MM Portal - Critical Reviews in …, 2021 - Taylor & Francis
The evolution of organisms has been a subject of paramount debate for hundreds of years
and though major advances in the field have been made, the precise mechanisms …

Evolutionary dynamics of transposable elements in Magnaporthe oryzae reveal evidence of genomic transfer and key differences between rice and wheat blast …

AA Nakamoto, PM Joubert, KV Krasileva - bioRxiv, 2022 - biorxiv.org
Fungal plant pathogens pose a significant threat to biodiversity and food security worldwide.
This threat is aggravated by their rapidly evolving genomes that adapt to evade host plant …

[HTML][HTML] Malaria in the 'Omics Era'

M Pegoraro, GD Weedall - Genes, 2021 - mdpi.com
Genomics has revolutionised the study of the biology of parasitic diseases. The first
Eukaryotic parasite to have its genome sequenced was the malaria parasite Plasmodium …

Regional centromere configuration in the fungal pathogens of the Pneumocystis genus

OH Cissé, SJ Curran, HD Folco, Y Liu, L Bishop… - Mbio, 2024 - Am Soc Microbiol
Centromeres are constricted chromosomal regions that are essential for cell division. In
eukaryotes, centromeres display a remarkable architectural and genetic diversity. The basis …

[HTML][HTML] Identification of Putative Virulence Genes by DNA Methylation Studies in the Cereal Pathogen Fusarium graminearum

F Tini, G Beccari, G Marconi, A Porceddu, M Sulyok… - Cells, 2021 - mdpi.com
DNA methylation mediates organisms' adaptations to environmental changes in a wide
range of species. We investigated if a such a strategy is also adopted by Fusarium …