Proximity-based modalities for biology and medicine

X Liu, A Ciulli - ACS Central Science, 2023 - ACS Publications
Molecular proximity orchestrates biological function, and blocking existing proximities is an
established therapeutic strategy. By contrast, strengthening or creating neoproximity with …

Targeted protein degradation: from mechanisms to clinic

JM Tsai, RP Nowak, BL Ebert, ES Fischer - Nature Reviews Molecular …, 2024 - nature.com
Targeted protein degradation refers to the use of small molecules to induce the selective
degradation of proteins. In its most common form, this degradation is achieved through …

Advancing targeted protein degradation via multiomics profiling and artificial intelligence

M Duran-Frigola, M Cigler… - Journal of the American …, 2023 - ACS Publications
Only around 20% of the human proteome is considered to be druggable with small-molecule
antagonists. This leaves some of the most compelling therapeutic targets outside the reach …

[HTML][HTML] Proteomic approaches advancing targeted protein degradation

G Sathe, GP Sapkota - Trends in pharmacological sciences, 2023 - cell.com
Targeted protein degradation (TPD) is an emerging modality for research and therapeutics.
Most TPD approaches harness cellular ubiquitin-dependent proteolytic pathways …

Targeted protein degradation: clinical advances in the field of oncology

AKAA Salama, MV Trkulja, E Casanova… - International Journal of …, 2022 - mdpi.com
The field of targeted protein degradation (TPD) is a rapidly developing therapeutic modality
with the promise to tame disease-relevant proteins in ways that are difficult or impossible to …

Noncanonical assembly, neddylation and chimeric cullin–RING/RBR ubiquitylation by the 1.8 MDa CUL9 E3 ligase complex

D Horn-Ghetko, LVM Hopf, I Tripathi-Giesgen… - Nature Structural & …, 2024 - nature.com
Ubiquitin ligation is typically executed by hallmark E3 catalytic domains. Two such
domains,'cullin–RING'and 'RBR', are individually found in several hundred human E3 …

Ubiquitin-specific proximity labeling for the identification of E3 ligase substrates

HT Huang, RJ Lumpkin, RW Tsai, S Su, X Zhao… - Nature Chemical …, 2024 - nature.com
Protein ubiquitylation controls diverse processes within eukaryotic cells, including protein
degradation, and is often dysregulated in disease. Moreover, small-molecule degraders that …

[PDF][PDF] Cullin-RING ligases employ geometrically optimized catalytic partners for substrate targeting

J Li, N Purser, J Liwocha, DC Scott, HA Byers… - Molecular Cell, 2024 - cell.com
Cullin-RING ligases (CRLs) ubiquitylate specific substrates selected from other cellular
proteins. Substrate discrimination and ubiquitin transferase activity were thought to be strictly …

Emerging strategies for prospective discovery of molecular glue degraders

B Wang, S Cao, N Zheng - Current Opinion in Structural Biology, 2024 - Elsevier
Molecular glue (MG) degraders are monovalent small molecule compounds that co-opt E3
ubiquitin ligases to target neo-substrates for proteasomal degradation. Here, we provide a …

[HTML][HTML] Pooled endogenous protein tagging and recruitment for scalable discovery of effectors for induced proximity therapeutics

YV Serebrenik, D Mani, T Maujean, GM Burslem… - Research …, 2023 - ncbi.nlm.nih.gov
The field of induced proximity therapeutics is in its ascendancy but is limited by a lack of
scalable tools to systematically explore effector-target protein pairs in an unbiased manner …