Maximizing CRISPRi efficacy and accessibility with dual-sgRNA libraries and optimal effectors

JM Replogle, JL Bonnar, AN Pogson, CR Liem… - Elife, 2022 - elifesciences.org
CRISPR interference (CRISPRi) enables programmable, reversible, and titratable
repression of gene expression (knockdown) in mammalian cells. Initial CRISPRi-mediated …

[HTML][HTML] CRISPR-based approaches for the high-throughput characterization of long non-coding RNAs

J Hazan, AC Bester - Non-coding RNA, 2021 - mdpi.com
Over the last decade, tens of thousands of new long non-coding RNAs (lncRNAs) have been
identified in the human genome. Nevertheless, except for a handful of genes, the genetic …

[HTML][HTML] Emerging roles and mechanisms of lncRNA FOXD3-AS1 in human diseases

Q Yao, X Zhang, D Chen - Frontiers in Oncology, 2022 - frontiersin.org
Numerous long noncoding RNAs (lncRNAs) have been identified as powerful regulators of
human diseases. The lncRNA FOXD3-AS1 is a novel lncRNA that was recently shown to …

CRISPRi screens identify the lncRNA, LOUP, as a multifunctional locus regulating macrophage differentiation and inflammatory signaling

H Halasz, E Malekos, S Covarrubias… - Proceedings of the …, 2024 - National Acad Sciences
Long noncoding RNAs (lncRNAs) account for the largest portion of RNA from the
transcriptome, yet most of their functions remain unknown. Here, we performed two …

[HTML][HTML] Integration of transcription regulation and functional genomic data reveals lncRNA SNHG6's role in hematopoietic differentiation and leukemia

JM Hazan, R Amador, T Ali-Nasser, T Lahav… - Journal of Biomedical …, 2024 - Springer
Abstract Background Long non-coding RNAs (lncRNAs) are pivotal players in cellular
processes, and their unique cell-type specific expression patterns render them attractive …

[HTML][HTML] Reduction of GAS5 and FOXD3-AS1 long non-coding RNAs in patients with bipolar disorder

B Zamani, M Mehrab Mohseni, B Naghavi Gargari… - Scientific Reports, 2023 - nature.com
Bipolar disorder (BD) patients suffer from severe disability and premature death because of
failure in prognosis, diagnosis, and treatment. Although neural mechanisms of bipolar have …

LncRNA LAMTOR5‐AS1 sponges miR‐210‐3p and regulates cervical cancer progression

B Yang, Z Wang, Y Deng, L Xiao… - Journal of Obstetrics and …, 2022 - Wiley Online Library
Aim Cervical cancer has attracted increasing attention in recent years, and the incidence
has shown a trend of younger age. Therefore, it is an effective method to regulate the …

[HTML][HTML] The Current Situation and Development Prospect of Whole-Genome Screening

C Yang, Y Lei, T Ren, M Yao - International Journal of Molecular Sciences, 2024 - mdpi.com
High-throughput genetic screening is useful for discovering critical genes or gene
sequences that trigger specific cell functions and/or phenotypes. Loss-of-function genetic …

CRISPRi screens identify the lncRNA, LOUP, as a multifunctional locus regulating macrophage differentiation epigenetically and inflammatory signaling through a …

H Halasz, E Malekos, S Covarrubias, S Yitiz… - BioRxiv, 2023 - biorxiv.org
Long non-coding RNAs (lncRNAs) account for the largest portion of RNA from the
transcriptome, yet most of their functions remain unknown. Here we performed two …

[HTML][HTML] Specific gene expression signatures of low grade meningiomas

EN Tsitsikov, S Hameed, SA Tavakol… - Frontiers in …, 2023 - frontiersin.org
Introduction Meningiomas are the most common primary central nervous system (CNS)
tumors in adults, representing approximately one-third of all primary adult CNS tumors …