Multi-omics integration in the age of million single-cell data
An explosion in single-cell technologies has revealed a previously underappreciated
heterogeneity of cell types and novel cell-state associations with sex, disease, development …
heterogeneity of cell types and novel cell-state associations with sex, disease, development …
[HTML][HTML] Simultaneous trimodal single-cell measurement of transcripts, epitopes, and chromatin accessibility using TEA-seq
E Swanson, C Lord, J Reading, AT Heubeck… - Elife, 2021 - elifesciences.org
Single-cell measurements of cellular characteristics have been instrumental in
understanding the heterogeneous pathways that drive differentiation, cellular responses to …
understanding the heterogeneous pathways that drive differentiation, cellular responses to …
Recent advances in microfluidic single-cell analysis and its applications in drug development
Y Jiao, L Gao, Y Ji, W Liu - TrAC Trends in Analytical Chemistry, 2022 - Elsevier
Cellular heterogeneity is prevalent in all cell populations. Single-cell analysis (SCA) could
unveil the heterogeneity and thus gain unique insights into complex biological processes …
unveil the heterogeneity and thus gain unique insights into complex biological processes …
[HTML][HTML] Biologically informed deep learning to query gene programs in single-cell atlases
M Lotfollahi, S Rybakov, K Hrovatin… - Nature Cell …, 2023 - nature.com
The increasing availability of large-scale single-cell atlases has enabled the detailed
description of cell states. In parallel, advances in deep learning allow rapid analysis of newly …
description of cell states. In parallel, advances in deep learning allow rapid analysis of newly …
[HTML][HTML] Follicle-stimulating hormone orchestrates glucose-stimulated insulin secretion of pancreatic islets
Y Cheng, H Zhu, J Ren, HY Wu, JE Yu, LY Jin… - Nature …, 2023 - nature.com
Follicle-stimulating hormone (FSH) is involved in mammalian reproduction via binding to
FSH receptor (FSHR). However, several studies have found that FSH and FSHR play …
FSH receptor (FSHR). However, several studies have found that FSH and FSHR play …
[HTML][HTML] Delineating mouse β-cell identity during lifetime and in diabetes with a single cell atlas
Although multiple pancreatic islet single-cell RNA-sequencing (scRNA-seq) datasets have
been generated, a consensus on pancreatic cell states in development, homeostasis and …
been generated, a consensus on pancreatic cell states in development, homeostasis and …
[HTML][HTML] Lessons from single-cell RNA sequencing of human islets
Islet dysfunction is central in type 2 diabetes and full-blown type 2 diabetes develops first
when the beta cells lose their ability to secrete adequate amounts of insulin in response to …
when the beta cells lose their ability to secrete adequate amounts of insulin in response to …
[HTML][HTML] Using single-nucleus RNA-sequencing to interrogate transcriptomic profiles of archived human pancreatic islets
Background Human pancreatic islets are a central focus of research in metabolic studies.
Transcriptomics is frequently used to interrogate alterations in cultured human islet cells …
Transcriptomics is frequently used to interrogate alterations in cultured human islet cells …
[HTML][HTML] Challenges in translational machine learning
A Couckuyt, R Seurinck, A Emmaneel, K Quintelier… - Human Genetics, 2022 - Springer
Abstract Machine learning (ML) algorithms are increasingly being used to help implement
clinical decision support systems. In this new field, we define as “translational machine …
clinical decision support systems. In this new field, we define as “translational machine …
[HTML][HTML] The potential roles of artemisinin and its derivatives in the treatment of type 2 diabetes mellitus
Y Jiang, J Shui, B Zhang, J Chin, R Yue - Frontiers in Pharmacology, 2020 - frontiersin.org
Type 2 diabetes mellitus (T2DM) is a chronic disease that has become a global public health
problem. Studies on T2DM prevention and treatment mostly focus on discovering …
problem. Studies on T2DM prevention and treatment mostly focus on discovering …