Concepts of artificial intelligence for computer-assisted drug discovery
X Yang, Y Wang, R Byrne, G Schneider… - Chemical …, 2019 - ACS Publications
Artificial intelligence (AI), and, in particular, deep learning as a subcategory of AI, provides
opportunities for the discovery and development of innovative drugs. Various machine …
opportunities for the discovery and development of innovative drugs. Various machine …
Delta machine learning to improve scoring-ranking-screening performances of protein–ligand scoring functions
Protein–ligand scoring functions are widely used in structure-based drug design for fast
evaluation of protein–ligand interactions, and it is of strong interest to develop scoring …
evaluation of protein–ligand interactions, and it is of strong interest to develop scoring …
[HTML][HTML] Performance of machine-learning scoring functions in structure-based virtual screening
Classical scoring functions have reached a plateau in their performance in virtual screening
and binding affinity prediction. Recently, machine-learning scoring functions trained on …
and binding affinity prediction. Recently, machine-learning scoring functions trained on …
Incorporating explicit water molecules and ligand conformation stability in machine-learning scoring functions
Structure-based drug design is critically dependent on accuracy of molecular docking
scoring functions, and there is of significant interest to advance scoring functions with …
scoring functions, and there is of significant interest to advance scoring functions with …
[HTML][HTML] Machine learning and AI-based approaches for bioactive ligand discovery and GPCR-ligand recognition
S Raschka, B Kaufman - Methods, 2020 - Elsevier
In the last decade, machine learning and artificial intelligence applications have received a
significant boost in performance and attention in both academic research and industry. The …
significant boost in performance and attention in both academic research and industry. The …
Tapping on the black box: how is the scoring power of a machine-learning scoring function dependent on the training set?
In recent years, protein–ligand interaction scoring functions derived through machine-
learning are repeatedly reported to outperform conventional scoring functions. However …
learning are repeatedly reported to outperform conventional scoring functions. However …
Supervised machine learning methods applied to predict ligand-binding affinity
GS Heck, VO Pintro, RR Pereira… - Current medicinal …, 2017 - ingentaconnect.com
Background: Calculation of ligand-binding affinity is an open problem in computational
medicinal chemistry. The ability to computationally predict affinities has a beneficial impact …
medicinal chemistry. The ability to computationally predict affinities has a beneficial impact …
[HTML][HTML] Prediction of various freshness indicators in fish fillets by one multispectral imaging system
S Khoshnoudi-Nia, M Moosavi-Nasab - Scientific Reports, 2019 - nature.com
In current study, a simple multispectral imaging (430–1010 nm) system along with linear and
non-linear regressions were used to assess the various fish spoilage indicators during 12 …
non-linear regressions were used to assess the various fish spoilage indicators during 12 …
Improving small molecule virtual screening strategies for the next generation of therapeutics
BM Wingert, CJ Camacho - Current opinion in chemical biology, 2018 - Elsevier
The new generation of post-genomic targets, such as protein–protein interactions (PPIs),
often require new chemotypes not well represented in current compound libraries. This is …
often require new chemotypes not well represented in current compound libraries. This is …