[PDF][PDF] De novo domestication: an alternative route toward new crops for the future

AR Fernie, J Yan - Molecular plant, 2019 - cell.com
Current global agricultural production must feed over 7 billion people. However, productivity
varies greatly across the globe and is under threat from both increased competitions for land …

Recent advances and future perspectives in cotton research

G Huang, JQ Huang, XY Chen… - Annual review of plant …, 2021 - annualreviews.org
Cotton is not only the world's most important natural fiber crop, but it is also an ideal system
in which to study genome evolution, polyploidization, and cell elongation. With the assembly …

[HTML][HTML] Gossypium barbadense and Gossypium hirsutum genomes provide insights into the origin and evolution of allotetraploid cotton

Y Hu, J Chen, L Fang, Z Zhang, W Ma, Y Niu, L Ju… - Nature …, 2019 - nature.com
Allotetraploid cotton is an economically important natural-fiber-producing crop worldwide.
After polyploidization, Gossypium hirsutum L. evolved to produce a higher fiber yield and to …

[HTML][HTML] Reference genome sequences of two cultivated allotetraploid cottons, Gossypium hirsutum and Gossypium barbadense

M Wang, L Tu, D Yuan, D Zhu, C Shen, J Li, F Liu… - Nature …, 2019 - nature.com
Allotetraploid cotton species (Gossypium hirsutum and Gossypium barbadense) have long
been cultivated worldwide for natural renewable textile fibers. The draft genome sequences …

Resequencing a core collection of upland cotton identifies genomic variation and loci influencing fiber quality and yield

Z Ma, S He, X Wang, J Sun, Y Zhang, G Zhang, L Wu… - Nature …, 2018 - nature.com
Upland cotton is the most important natural-fiber crop. The genomic variation of diverse
germplasms and alleles underpinning fiber quality and yield should be extensively explored …

[HTML][HTML] Cotton pan-genome retrieves the lost sequences and genes during domestication and selection

J Li, D Yuan, P Wang, Q Wang, M Sun, Z Liu, H Si, Z Xu… - Genome biology, 2021 - Springer
Background Millennia of directional human selection has reshaped the genomic architecture
of cultivated cotton relative to wild counterparts, but we have limited understanding of the …

Genomic analyses in cotton identify signatures of selection and loci associated with fiber quality and yield traits

L Fang, Q Wang, Y Hu, Y Jia, J Chen, B Liu, Z Zhang… - Nature …, 2017 - nature.com
Upland cotton (Gossypium hirsutum) is the most important natural fiber crop in the world.
The overall genetic diversity among cultivated species of cotton and the genetic changes …

[PDF][PDF] Structural variation (SV)-based pan-genome and GWAS reveal the impacts of SVs on the speciation and diversification of allotetraploid cottons

S Jin, Z Han, Y Hu, Z Si, F Dai, L He, Y Cheng, Y Li… - Molecular Plant, 2023 - cell.com
Structural variations (SVs) have long been described as being involved in the origin,
adaption, and domestication of species. However, the underlying genetic and genomic …

Long noncoding RNAs involve in resistance to Verticillium dahliae, a fungal disease in cotton

L Zhang, M Wang, N Li, H Wang, P Qiu… - Plant biotechnology …, 2018 - Wiley Online Library
Long noncoding RNA s (lnc RNA s) have several known functions in plant development, but
their possible roles in responding to plant disease remain largely unresolved. In this study …

CottonMD: a multi-omics database for cotton biological study

Z Yang, J Wang, Y Huang, S Wang, L Wei… - Nucleic Acids …, 2023 - academic.oup.com
Cotton is an important economic crop, and many loci for important traits have been
identified, but it remains challenging and time-consuming to identify candidate or causal …