Mechanisms and regulation of human mitochondrial transcription

BG Tan, CM Gustafsson, M Falkenberg - Nature Reviews Molecular Cell …, 2024 - nature.com
The expression of mitochondrial genes is regulated in response to the metabolic needs of
different cell types, but the basic mechanisms underlying this process are still poorly …

DNA packaging by molecular motors: from bacteriophage to human chromosomes

B Prevo, WC Earnshaw - Nature Reviews Genetics, 2024 - nature.com
Dense packaging of genomic DNA is crucial for organismal survival, as DNA length always
far exceeds the dimensions of the cells that contain it. Organisms, therefore, use …

Transcription-induced domains form the elementary constraining building blocks of bacterial chromosomes

A Bignaud, C Cockram, C Borde, J Groseille… - Nature Structural & …, 2024 - nature.com
Transcription generates local topological and mechanical constraints on the DNA fiber,
leading to the generation of supercoiled chromosome domains in bacteria. However, the …

DNA-measuring Wadjet SMC ATPases restrict smaller circular plasmids by DNA cleavage

HW Liu, F Roisné-Hamelin, B Beckert, Y Li… - Molecular cell, 2022 - cell.com
Structural maintenance of chromosome (SMC) complexes fold DNA by loop extrusion to
support chromosome segregation and genome maintenance. Wadjet systems …

Interconnecting solvent quality, transcription, and chromosome folding in Escherichia coli

Y Xiang, IV Surovtsev, Y Chang, SK Govers, BR Parry… - Cell, 2021 - cell.com
All cells fold their genomes, including bacterial cells, where the chromosome is compacted
into a domain-organized meshwork called the nucleoid. How compaction and domain …

Interaction between transcribing RNA polymerase and topoisomerase I prevents R-loop formation in E. coli

D Sutormin, A Galivondzhyan, O Musharova… - Nature …, 2022 - nature.com
Bacterial topoisomerase I (TopoI) removes excessive negative supercoiling and is thought to
relax DNA molecules during transcription, replication and other processes. Using ChIP-Seq …

Mechanistic approaches to the application of nano-zinc in the poultry and biomedical industries: A comprehensive review of future perspectives and challenges

Z Younas, ZUR Mashwani, I Ahmad, M Khan, S Zaman… - Molecules, 2023 - mdpi.com
Bio-fortification is a new, viable, cost-effective, and long-term method of administering crucial
minerals to a populace with limited exposure to diversified foods and other nutritional …

Transcription-driven DNA supercoiling counteracts H-NS-mediated gene silencing in bacterial chromatin

N Figueroa-Bossi, R Fernández-Fernández… - Nature …, 2024 - nature.com
In all living cells, genomic DNA is compacted through interactions with dedicated proteins
and/or the formation of plectonemic coils. In bacteria, DNA compaction is achieved …

Generation and repair of postreplication gaps in Escherichia coli

MM Cox, MF Goodman, JL Keck… - Microbiology and …, 2023 - Am Soc Microbiol
When replication forks encounter template lesions, one result is lesion skipping, where the
stalled DNA polymerase transiently stalls, disengages, and then reinitiates downstream to …

Development and efficacy of Streptococcus iniae live-attenuated vaccines in Nile tilapia, Oreochromis niloticus

TI Heckman, K Shahin, EE Henderson, MJ Griffin… - Fish & Shellfish …, 2022 - Elsevier
Streptococcus iniae is a re-emerging bacterial pathogen in freshwater and marine
aquaculture worldwide. There are no commercial vaccines available for S. iniae in the …