Genome editing for plant research and crop improvement
The advent of clustered regularly interspaced short palindromic repeat (CRISPR) has had a
profound impact on plant biology, and crop improvement. In this review, we summarize the …
profound impact on plant biology, and crop improvement. In this review, we summarize the …
[HTML][HTML] Prime editing with genuine Cas9 nickases minimizes unwanted indels
Unlike CRISPR-Cas9 nucleases, which yield DNA double-strand breaks (DSBs), Cas9
nickases (nCas9s), which are created by replacing key catalytic amino-acid residues in one …
nickases (nCas9s), which are created by replacing key catalytic amino-acid residues in one …
[HTML][HTML] An AsCas12f-based compact genome-editing tool derived by deep mutational scanning and structural analysis
T Hino, SN Omura, R Nakagawa, T Togashi… - Cell, 2023 - cell.com
SpCas9 and AsCas12a are widely utilized as genome-editing tools in human cells.
However, their relatively large size poses a limitation for delivery by cargo-size-limited …
However, their relatively large size poses a limitation for delivery by cargo-size-limited …
CRISPR-Cas-based engineering of probiotics
L Liu, SE Helal, N Peng - BioDesign Research, 2023 - spj.science.org
Probiotics are the treasure of the microbiology fields. They have been widely used in the
food industry, clinical treatment, and other fields. The equivocal health-promoting effects and …
food industry, clinical treatment, and other fields. The equivocal health-promoting effects and …
Detect-seq reveals out-of-protospacer editing and target-strand editing by cytosine base editors
Cytosine base editors (CBEs) have the potential to correct human pathogenic point
mutations. However, their genome-wide specificity remains poorly understood. Here we …
mutations. However, their genome-wide specificity remains poorly understood. Here we …
A pathway independent multi-modular ordered control system based on thermosensors and CRISPRi improves bioproduction in Bacillus subtilis
W Yu, K Jin, Y Wu, Q Zhang, Y Liu, J Li… - Nucleic Acids …, 2022 - academic.oup.com
Dynamic regulation is an effective strategy for control of gene expression in microbial cell
factories. In some pathway contexts, several metabolic modules must be controlled in a time …
factories. In some pathway contexts, several metabolic modules must be controlled in a time …
[HTML][HTML] Multiplexed base editing through Cas12a variant-mediated cytosine and adenine base editors
F Chen, M Lian, B Ma, S Gou, X Luo, K Yang… - Communications …, 2022 - nature.com
Cas12a can process multiple sgRNAs from a single transcript of CRISPR array, conferring
advantages in multiplexed base editing when incorporated into base editor systems, which …
advantages in multiplexed base editing when incorporated into base editor systems, which …
Chemical and biological approaches to interrogate off-target effects of genome editing tools
Various genome editing tools have been developed for programmable genome
manipulation at specified genomic loci. However, it is crucial to comprehensively interrogate …
manipulation at specified genomic loci. However, it is crucial to comprehensively interrogate …
[HTML][HTML] Engineered Cas12a-Plus nuclease enables gene editing with enhanced activity and specificity
H Huang, G Huang, Z Tan, Y Hu, L Shan, J Zhou… - BMC biology, 2022 - Springer
Abstract Background The CRISPR-Cas12a (formerly Cpf1) system is a versatile gene-
editing tool with properties distinct from the broadly used Cas9 system. Features such as …
editing tool with properties distinct from the broadly used Cas9 system. Features such as …
Mg2+-dependent conformational rearrangements of CRISPR-Cas12a R-loop complex are mandatory for complete double-stranded DNA cleavage
H Son, J Park, I Hwang, Y Jung… - Proceedings of the …, 2021 - National Acad Sciences
CRISPR-Cas12a, an RNA-guided DNA targeting endonuclease, has been widely used for
genome editing and nucleic acid detection. As part of the essential processes for both of …
genome editing and nucleic acid detection. As part of the essential processes for both of …