ADAR1 prevents autoinflammation by suppressing spontaneous ZBP1 activation
R de Reuver, S Verdonck, E Dierick, J Nemegeer… - Nature, 2022 - nature.com
The RNA-editing enzyme adenosine deaminase acting on RNA 1 (ADAR1) limits the
accumulation of endogenous immunostimulatory double-stranded RNA (dsRNA). In …
accumulation of endogenous immunostimulatory double-stranded RNA (dsRNA). In …
Direct identification of A-to-I editing sites with nanopore native RNA sequencing
TA Nguyen, JWJ Heng, P Kaewsapsak, EPL Kok… - Nature …, 2022 - nature.com
Inosine is a prevalent RNA modification in animals and is formed when an adenosine is
deaminated by the ADAR family of enzymes. Traditionally, inosines are identified indirectly …
deaminated by the ADAR family of enzymes. Traditionally, inosines are identified indirectly …
lncRNAfunc: a knowledgebase of lncRNA function in human cancer
The long non-coding RNAs associating with other molecules can coordinate several
physiological processes and their dysfunction can impact diverse human diseases. To date …
physiological processes and their dysfunction can impact diverse human diseases. To date …
[HTML][HTML] Contribution of A-to-I RNA editing, M6A RNA Methylation, and Alternative Splicing to physiological brain aging and neurodegenerative diseases
V Tassinari, P La Rosa, E Guida, A Colopi… - Mechanisms of ageing …, 2023 - Elsevier
Aging is a physiological and progressive phenomenon in all organisms' life cycle,
characterized by the accumulation of degenerative processes triggered by several …
characterized by the accumulation of degenerative processes triggered by several …
RMBase v3. 0: decode the landscape, mechanisms and functions of RNA modifications
J Xuan, L Chen, Z Chen, J Pang, J Huang… - Nucleic Acids …, 2024 - academic.oup.com
Although over 170 chemical modifications have been identified, their prevalence,
mechanism and function remain largely unknown. To enable integrated analysis of diverse …
mechanism and function remain largely unknown. To enable integrated analysis of diverse …
Neonatal BCG vaccination is associated with a long-term DNA methylation signature in circulating monocytes
S Bannister, B Kim, J Domínguez-Andrés, G Kilic… - Science …, 2022 - science.org
Trained immunity describes the capacity of innate immune cells to develop heterologous
memory in response to certain exogenous exposures. This phenomenon mediates, at least …
memory in response to certain exogenous exposures. This phenomenon mediates, at least …
A brief review of machine learning methods for RNA methylation sites prediction
H Wang, S Wang, Y Zhang, S Bi, X Zhu - Methods, 2022 - Elsevier
Thanks to the tremendous advancement of deep sequencing and large-scale profiling,
epitranscriptomics has become a rapidly growing field. As one of the most important parts of …
epitranscriptomics has become a rapidly growing field. As one of the most important parts of …
[HTML][HTML] Epitranscriptomic subtyping, visualization, and denoising by global motif visualization
J Liu, T Huang, J Yao, T Zhao, Y Zhang… - Nature …, 2023 - nature.com
Advances in sequencing technologies have empowered epitranscriptomic profiling at the
single-base resolution. Putative RNA modification sites identified from a single high …
single-base resolution. Putative RNA modification sites identified from a single high …
[HTML][HTML] The snoRNA-like lncRNA LNC-SNO49AB drives leukemia by activating the RNA-editing enzyme ADAR1
W Huang, YM Sun, Q Pan, K Fang, XT Chen, ZC Zeng… - Cell discovery, 2022 - nature.com
Long noncoding RNAs (lncRNAs) are usually 5′ capped and 3′ polyadenylated, similar to
most typical mRNAs. However, recent studies revealed a type of snoRNA-related lncRNA …
most typical mRNAs. However, recent studies revealed a type of snoRNA-related lncRNA …
[HTML][HTML] ADAR1 interaction with Z-RNA promotes editing of endogenous double-stranded RNA and prevents MDA5-dependent immune activation
R de Reuver, E Dierick, B Wiernicki, K Staes, L Seys… - Cell reports, 2021 - cell.com
Loss of function of adenosine deaminase acting on double-stranded RNA (dsRNA)-1
(ADAR1) causes the severe autoinflammatory disease Aicardi-Goutières syndrome (AGS) …
(ADAR1) causes the severe autoinflammatory disease Aicardi-Goutières syndrome (AGS) …