Comparative Study on Codon Usage Patterns across Chloroplast Genomes of Eighteen Taraxacum Species

Y Yang, X Wang, Z Shi - Horticulturae, 2024 - mdpi.com
This study investigates codon usage bias within the chloroplast genomes of 18 Taraxacum
species, focusing on the base composition and various metrics including GC content …

Codon usage bias analysis of the chloroplast genome of Bothriochloa ischaemum

SY Gao, YY Li, ZQ Yang, KH Dong… - Acta Prataculturae …, 2023 - cyxb.magtech.com.cn
The chloroplast genome is highly conserved and has a slow evolutionary rate. The study of
chloroplast genome codon bias could clarify the expression efficiency of genes, and could …

Comparative analysis of codon usage bias in chloroplast genomes of ten medicinal species of Rutaceae

L Shen, S Chen, M Liang, S Qu, S Feng, D Wang… - BMC Plant …, 2024 - Springer
Rutaceae family comprises economically important plants due to their extensive applications
in spices, food, oil, medicine, etc. The Rutaceae plants is able to better utilization through …

[HTML][HTML] Insight on genetic features prevalent in five Ipomoea species using comparative codon pattern analysis reveals differences in major codons and reduced GC …

Y Xiao, H Huang, Y Chen, S Zheng, J Chen… - Biochemical and …, 2023 - Elsevier
Ipomoea plants possess important commercial, medicinal, and ornamental value. Molecular
and morphological studies have confirmed that most species of this genus exhibit similar …

The complete mitochondrial genome of the biodiesel plant Jatropha curcas L.

S Shim, J Ha - Mitochondrial DNA Part B, 2023 - Taylor & Francis
Abstract Jatropha curcas (Linnaeus, 1753) is a plant species in the order Malpighiales and
the family Euphorbiaceae and is native to the tropical regions of America, such as Mexico …

[PDF][PDF] Comparative Analysis of Codon Usage Patterns in Chloroplast Genomes of Cherries. Forests 2022, 13, 1891

YF Song, QH Yang, XG Yi, ZQ Zhu, XR Wang, M Li - 2022 - researchgate.net
Synonymous codon usage bias (SCUB) analysis is an effective method to explore species
specificity, evolutionary relationships and mRNA translation, as well as to discover novel …

A comparative study of the chloroplast genomes of five Lepidium species with high medicinal value

Q Zhou, Y Chen, J Wang, M Li, W Zeng… - Functional Plant …, 2022 - CSIRO Publishing
Plantgenomics is a rapidly developing field in medicinal plant research. This study analysed
the relevant information of chloroplasts genome sequences of five medicinal plants from the …

Molecular Characterization of Fischerella uthpalarensis, the first subsection V cyanobiont from a tropical Azolla species containing dual nitrogenases

BLDU Pushpakumara, D Gunawardana - bioRxiv, 2023 - biorxiv.org
There have been theories presented on Azolla cyanobionts, known for voracious nitrogen
fixation, vertical transmission of cyanobiont and helping transform a greenhouse planet to an …

Complete plastomes of Engelhardia provide insights into evolution and phylogeny of Juglandaceae species

Y Huang, XJ Jin, CY Zhang, P Li, HH Meng, YH Zhang - 2024 - researchsquare.com
Results The 13 Engelhardia plastomes were highly similar in genome size, gene content,
and order. They exhibited a typical quadripartite structure, with lengths from 161,069 bp to …

[PDF][PDF] Genome-Wide Identification and Codon Bias of NBS-LRR Gene Family in Banana

H Fang, S Yu, M Li, J Sun, B Mo - 2023 - scholar.archive.org
As the largest family of plant resistance (R) proteins, nucleotide binding site-leucine-rich
repeat (NBS-LRR) proteins play an important role in pathogen defense. In order to identify …