The biogeography of host‐associated bacterial microbiomes: Revisiting classic biodiversity patterns

A Härer, DJ Rennison - Global Ecology and Biogeography, 2023 - Wiley Online Library
Background The question of which ecological and evolutionary processes structure the
distribution of biodiversity has intrigued scientists for centuries, and historically, inferences …

Sparse species interactions reproduce abundance correlation patterns in microbial communities

J Camacho-Mateu, A Lampo, M Sireci… - Proceedings of the …, 2024 - National Acad Sciences
During the last decades, macroecology has identified broad-scale patterns of abundances
and diversity of microbial communities and put forward some potential explanations for …

Environmental heterogeneity and dispersal limitation simultaneously determine the spatial scaling of different microbial functional groups

Y Li, K Ma, W Song, J Zhou, X Liu, M Wang… - Science of The Total …, 2023 - Elsevier
Uncovering the mechanisms driving patterns of diversity across space and through time is of
critical importance in microbial community ecology. Previous studies suggest that …

[HTML][HTML] The community ecology perspective of omics data

SD Jurburg, F Buscot, A Chatzinotas, NM Chaudhari… - Microbiome, 2022 - Springer
The measurement of uncharacterized pools of biological molecules through techniques
such as metabarcoding, metagenomics, metatranscriptomics, metabolomics, and …

Methods and approaches to advance soil macroecology

HJ White, L León‐Sánchez, VJ Burton… - Global Ecology and …, 2020 - Wiley Online Library
Motivation and aim Soil biodiversity is central to ecosystem function and services. It
represents most of terrestrial biodiversity and at least a quarter of all biodiversity on Earth …

Dormancy dampens the microbial distance–decay relationship

KJ Locey, ME Muscarella… - … of the Royal …, 2020 - royalsocietypublishing.org
Much of Earth's biodiversity has the capacity to engage in dormancy, a reversible state of
reduced metabolic activity. By increasing resilience to unfavourable conditions, dormancy …

A macroecological description of alternative stable states reproduces intra-and inter-host variability of gut microbiome

S Zaoli, J Grilli - Science Advances, 2021 - science.org
The most fundamental questions in microbial ecology concern the diversity and variability of
communities. Their composition varies widely across space and time, as a result of a …

Soil bacterial communities exhibit strong biogeographic patterns at fine taxonomic resolution

SK Bay, MA McGeoch, O Gillor, N Wieler, DJ Palmer… - Msystems, 2020 - Am Soc Microbiol
Bacteria have been inferred to exhibit relatively weak biogeographic patterns. To what
extent such findings reflect true biological phenomena or methodological artifacts remains …

Dormancy in metacommunities

NI Wisnoski, MA Leibold… - The American …, 2019 - journals.uchicago.edu
Although metacommunity ecology has improved our understanding of how dispersal affects
community structure and dynamics across spatial scales, it has yet to adequately account for …

Benthic bacteria and archaea in the North American Arctic reflect food supply regimes and impacts of coastal and riverine inputs

AM Walker, MB Leigh, SL Mincks - Deep Sea Research Part II: Topical …, 2023 - Elsevier
Benthic bacteria and archaea can be considered biogeochemical engineers as they play a
major role in organic matter (OM) degradation and nutrient cycling. As such, prokaryotic …