An overview of gene regulation in bacteria by small RNAs derived from mRNA 3′ ends
Over the past two decades, small noncoding RNAs (sRNAs) that regulate mRNAs by short
base pairing have gone from a curiosity to a major class of post-transcriptional regulators in …
base pairing have gone from a curiosity to a major class of post-transcriptional regulators in …
Regulation of mRNA stability during bacterial stress responses
DA Vargas-Blanco, SS Shell - Frontiers in microbiology, 2020 - frontiersin.org
Bacteria have a remarkable ability to sense environmental changes, swiftly regulating their
transcriptional and posttranscriptional machinery as a response. Under conditions that …
transcriptional and posttranscriptional machinery as a response. Under conditions that …
Bacterial cGAS senses a viral RNA to initiate immunity
Cyclic oligonucleotide-based antiphage signalling systems (CBASS) protect prokaryotes
from viral (phage) attack through the production of cyclic oligonucleotides, which activate …
from viral (phage) attack through the production of cyclic oligonucleotides, which activate …
RNA is a key component of extracellular DNA networks in Pseudomonas aeruginosa biofilms
S Mugunthan, LL Wong, FR Winnerdy… - Nature …, 2023 - nature.com
The extracellular matrix of bacterial biofilms consists of diverse components including
polysaccharides, proteins and DNA. Extracellular RNA (eRNA) can also be present …
polysaccharides, proteins and DNA. Extracellular RNA (eRNA) can also be present …
Species interactions constrain adaptation and preserve ecological stability in an experimental microbial community
Species loss within a microbial community can increase resource availability and spur
adaptive evolution. Environmental shifts that cause species loss or fluctuations in community …
adaptive evolution. Environmental shifts that cause species loss or fluctuations in community …
A model industrial workhorse: Bacillus subtilis strain 168 and its genome after a quarter of a century
The vast majority of genomic sequences are automatically annotated using various software
programs. The accuracy of these annotations depends heavily on the very few manual …
programs. The accuracy of these annotations depends heavily on the very few manual …
Gene regulation and transcriptomics
Borrelia (Borreliella) burgdorferi, along with closely related species, is the etiologic agent of
Lyme disease. The spirochete subsists in an enzootic cycle that encompasses acquisition …
Lyme disease. The spirochete subsists in an enzootic cycle that encompasses acquisition …
A natural single-guide RNA repurposes Cas9 to autoregulate CRISPR-Cas expression
RE Workman, T Pammi, BTK Nguyen, LW Graeff… - Cell, 2021 - cell.com
CRISPR-Cas systems provide prokaryotes with acquired immunity against viruses and
plasmids, but how these systems are regulated to prevent autoimmunity is poorly …
plasmids, but how these systems are regulated to prevent autoimmunity is poorly …
Gene autoregulation by 3'UTR-derived bacterial small RNAs
M Hoyos, M Huber, KU Förstner, K Papenfort - Elife, 2020 - elifesciences.org
Negative feedback regulation, that is the ability of a gene to repress its own synthesis, is the
most abundant regulatory motif known to biology. Frequently reported for transcriptional …
most abundant regulatory motif known to biology. Frequently reported for transcriptional …
NusG is an intrinsic transcription termination factor that stimulates motility and coordinates gene expression with NusA
NusA and NusG are transcription factors that stimulate RNA polymerase pausing in Bacillus
subtilis. While NusA was known to function as an intrinsic termination factor in B. subtilis, the …
subtilis. While NusA was known to function as an intrinsic termination factor in B. subtilis, the …