Deep reticulation: the long legacy of hybridization in vascular plant evolution

GW Stull, KK Pham, PS Soltis, DE Soltis - The Plant Journal, 2023 - Wiley Online Library
Hybridization has long been recognized as a fundamental evolutionary process in plants
but, until recently, our understanding of its phylogenetic distribution and biological …

Stochasticity in gene body methylation

C Goeldel, F Johannes - Current Opinion in Plant Biology, 2023 - Elsevier
Gene body methylation (gbM) is a widely conserved epigenetic feature of plant genomes.
Efforts to delineate the mechanisms by which gbM contributes to transcriptional regulation …

Environmental gradients reveal stress hubs pre-dating plant terrestrialization

A Dadras, JMR Fürst-Jansen, T Darienko, D Krone… - Nature Plants, 2023 - nature.com
Plant terrestrialization brought forth the land plants (embryophytes). Embryophytes account
for most of the biomass on land and evolved from streptophyte algae in a singular event …

Extraordinary preservation of gene collinearity over three hundred million years revealed in homosporous lycophytes

C Li, D Wickell, LY Kuo, X Chen, B Nie… - Proceedings of the …, 2024 - National Acad Sciences
Homosporous lycophytes (Lycopodiaceae) are a deeply diverged lineage in the plant tree of
life, having split from heterosporous lycophytes (Selaginella and Isoetes)~ 400 Mya …

Two long read-based genome assembly and annotation of polyploidy woody plants, Hibiscus syriacus L. using PacBio and Nanopore platforms

H Koo, GW Lee, SR Ko, S Go, SY Kwon, YM Kim… - Scientific Data, 2023 - nature.com
Improvements in long read DNA sequencing and related techniques facilitated the
generation of complex eukaryotic genomes. Despite these advances, the quality of …

[HTML][HTML] Chromosome-level genomes of multicellular algal sisters to land plants illuminate signaling network evolution

X Feng, J Zheng, I Irisarri, H Yu, B Zheng, Z Ali… - bioRxiv, 2023 - ncbi.nlm.nih.gov
The filamentous and unicellular algae of the class Zygnematophyceae are the closest algal
relatives of land plants. Inferring the properties of the last common ancestor shared by these …

Reciprocal expression of MADS-box genes and DNA methylation reconfiguration initiate bisexual cones in spruce

YY Feng, H Du, KY Huang, JH Ran… - Communications …, 2024 - nature.com
The naturally occurring bisexual cone of gymnosperms has long been considered a
possible intermediate stage in the origin of flowers, but the mechanisms governing bisexual …

Genome and transcriptome of Selaginella kraussiana reveal evolution of root apical meristems in vascular plants

W Liu, G Cai, N Zhai, H Wang, T Tang, Y Zhang… - Current Biology, 2023 - cell.com
The evolution of roots allowed vascular plants to adapt to land environments. Fossil
evidence indicates that roots evolved independently in euphyllophytes (ferns and seed …

The first homosporous lycophyte genome revealed the association between the recent dynamic accumulation of LTR-RTs and genome size variation

JG Yu, JY Tang, R Wei, MF Lan, RC Xiang… - Plant Molecular …, 2023 - Springer
The contrasting genome size between homosporous and heterosporous plants is
fascinating. Different from the heterosporous seed plants and mainly homosporous ferns, the …

Molecular and phylogenetic evidence of parallel expansion of anion channels in plants

S Li, L Wei, Q Gao, M Xu, Y Wang, Z Lin… - Plant …, 2024 - academic.oup.com
Aluminum-activated malate transporters (ALMTs) and slow anion channels (SLACs) are
important in various physiological processes in plants, including stomatal regulation, nutrient …