Mechanisms of bacterial transcription termination: all good things must end

A Ray-Soni, MJ Bellecourt… - Annual review of …, 2016 - annualreviews.org
Transcript termination is essential for accurate gene expression and the removal of RNA
polymerase (RNAP) at the ends of transcription units. In bacteria, two mechanisms are …

Bacterial transcription terminators: the RNA 3′-end chronicles

JM Peters, AD Vangeloff, R Landick - Journal of molecular biology, 2011 - Elsevier
The process of transcription termination is essential to proper expression of bacterial genes
and, in many cases, to the regulation of bacterial gene expression. Two types of bacterial …

In vitro selection and evolution of functional proteins by using ribosome display

J Hanes, A Plückthun - … of the National Academy of Sciences, 1997 - National Acad Sciences
We report here a system with which a correctly folded complete protein and its encoding
mRNA both remain attached to the ribosome and can be enriched for the ligand-binding …

Role of a peptide tagging system in degradation of proteins synthesized from damaged messenger RNA

KC Keiler, PRH Waller, RT Sauer - Science, 1996 - science.org
Variants of λ repressor and cytochrome b562 translated from messenger RNAs without stop
codons were modified by carboxyl terminal addition of an ssrA-encoded peptide tag and …

Picomolar affinity antibodies from a fully synthetic naive library selected and evolved by ribosome display

J Hanes, C Schaffitzel, A Knappik, A Plückthun - Nature biotechnology, 2000 - nature.com
Here we applied ribosome display to in vitro selection and evolution of single-chain antibody
fragments (scFvs) from a large synthetic library (Human Combinatorial Antibody Library; …

Transcription termination at intrinsic terminators: the role of the RNA hairpin.

KS Wilson, PH von Hippel - Proceedings of the National …, 1995 - National Acad Sciences
Intrinsic termination of transcription in Escherichia coli involves the formation of an RNA
hairpin in the nascent RNA. This hairpin plays a central role in the release of the transcript …

Measurement and modeling of intrinsic transcription terminators

G Cambray, JC Guimaraes, VK Mutalik… - Nucleic acids …, 2013 - academic.oup.com
The reliable forward engineering of genetic systems remains limited by the ad hoc reuse of
many types of basic genetic elements. Although a few intrinsic prokaryotic transcription …

Prediction of rho-independent transcriptional terminators in Escherichia coli

EA Lesnik, R Sampath, HB Levene… - Nucleic acids …, 2001 - academic.oup.com
A new algorithm called RNAMotif containing RNA structure and sequence constraints and a
thermodynamic scoring system was used to search for intrinsic rho-independent terminators …

Basic mechanisms of transcript elongation and its regulation

SM Uptain, CM Kane… - Annual review of …, 1997 - annualreviews.org
Ternary complexes of DNA-dependent RNA polymerase with its DNA template and nascent
transcript are central intermediates in transcription. In recent years, several unusual …

PolyU tail of rho-independent terminator of bacterial small RNAs is essential for Hfq action

H Otaka, H Ishikawa, T Morita… - Proceedings of the …, 2011 - National Acad Sciences
Major bacterial small RNAs (sRNAs) regulate the translation and stability of target mRNAs
through base pairing with the help of the RNA chaperone Hfq. The Hfq-dependent sRNAs …