Machine learning in bioprocess development: from promise to practice
Fostered by novel analytical techniques, digitalization, and automation, modern bioprocess
development provides large amounts of heterogeneous experimental data, containing …
development provides large amounts of heterogeneous experimental data, containing …
Analyzing and understanding the robustness of bioprocesses
L Becker, J Sturm, F Eiden, D Holtmann - Trends in Biotechnology, 2023 - cell.com
The robustness of bioprocesses is becoming increasingly important. The main driving forces
of this development are, in particular, increasing demands on product purities as well as …
of this development are, in particular, increasing demands on product purities as well as …
Fitness cost associated with cell phenotypic switching drives population diversification dynamics and controllability
L Henrion, JA Martinez, V Vandenbroucke… - Nature …, 2023 - nature.com
Isogenic cell populations can cope with stress conditions by switching to alternative
phenotypes. Even if it can lead to increased fitness in a natural context, this feature is …
phenotypes. Even if it can lead to increased fitness in a natural context, this feature is …
Hybrid deep modeling of a CHO-K1 fed-batch process: combining first-principles with deep neural networks
Introduction: Hybrid modeling combining First-Principles with machine learning is becoming
a pivotal methodology for Biopharma 4.0 enactment. Chinese Hamster Ovary (CHO) cells …
a pivotal methodology for Biopharma 4.0 enactment. Chinese Hamster Ovary (CHO) cells …
[HTML][HTML] High-resolution computation predicts that low dissolved CO concentrations and CO gradients promote ethanol production at industrial-scale gas fermentation
L Puiman, EA Benalcázar, C Picioreanu… - Biochemical …, 2024 - Elsevier
Gradients in dissolved gas concentrations are expected to affect the performance of large
reactors for anaerobic gas (CO, H 2, CO 2) fermentation. To study how these gradients, and …
reactors for anaerobic gas (CO, H 2, CO 2) fermentation. To study how these gradients, and …
BioDT: An Integrated Digital-Twin-Based Framework for Intelligent Biomanufacturing
B Zhao, X Li, W Sun, J Qian, J Liu, M Gao, X Guan… - Processes, 2023 - mdpi.com
The field of industrial biotechnology has shown an increasing interest in adopting digital
twins for improving process productivity and management efficiency. Despite its potential …
twins for improving process productivity and management efficiency. Despite its potential …
A Computational Model of Biotechnology
RMW Nasution, MKM Nasution - Computer Science On-line Conference, 2023 - Springer
One of the human endeavors to understand nature is to decipher natural objects, such as
biology, to form novelties, such as in biotechnology. The descriptions then have a model …
biology, to form novelties, such as in biotechnology. The descriptions then have a model …
Deep hybrid modeling of a HEK293 process: Combining long short‐term memory networks with first principles equations
JRC Ramos, J Pinto, G Poiares‐Oliveira… - Biotechnology and …, 2024 - Wiley Online Library
The combination of physical equations with deep learning is becoming a promising
methodology for bioprocess digitalization. In this paper, we investigate for the first time the …
methodology for bioprocess digitalization. In this paper, we investigate for the first time the …
Precise and versatile microplate reader-based analyses of biosensor signals from arrayed microbial colonies
FSF Hartmann, T Weiß, LLB Kastberg… - Frontiers in …, 2023 - frontiersin.org
Genetically encoded fluorescent biosensors have emerged as a powerful tool to support
phenotypic screenings of microbes. Optical analyses of fluorescent sensor signals from …
phenotypic screenings of microbes. Optical analyses of fluorescent sensor signals from …
Enhancing Biobased Volatile Fatty Acids Production from Olive Mill Solid Waste by Optimization of pH and Substrate to Inoculum Ratio
YA da Fonseca, AB de Camargos, GSM Gomes… - Processes, 2023 - mdpi.com
The pH and substrate-to-inoculum ratio (S/I) are important parameters in the anaerobic
fermentation of agroindustrial residues, and therefore the optimization of these two …
fermentation of agroindustrial residues, and therefore the optimization of these two …