Bioremediation 3.0: engineering pollutant-removing bacteria in the times of systemic biology

P Dvořák, PI Nikel, J Damborský, V de Lorenzo - Biotechnology advances, 2017 - Elsevier
Elimination or mitigation of the toxic effects of chemical waste released to the environment
by industrial and urban activities relies largely on the catalytic activities of microorganisms …

Molecular communication and nanonetwork for targeted drug delivery: A survey

UAK Chude-Okonkwo, R Malekian… - … Surveys & Tutorials, 2017 - ieeexplore.ieee.org
Molecular communication (MC) and molecular network (MN) are communication paradigms
that use biochemical signaling to achieve information exchange among naturally and …

Orthogonal light-activated DNA for patterned biocomputing within synthetic cells

D Hartmann, R Chowdhry, JM Smith… - Journal of the American …, 2023 - ACS Publications
Cell-free gene expression is a vital research tool to study biological systems in defined
minimal environments and has promising applications in biotechnology. Developing …

Tools for engineering coordinated system behaviour in synthetic microbial consortia

N Kylilis, ZA Tuza, GB Stan, KM Polizzi - Nature communications, 2018 - nature.com
Advancing synthetic biology to the multicellular level requires the development of multiple
cell-to-cell communication channels that propagate information with minimal signal …

[HTML][HTML] Biofilm architecture: An emerging synthetic biology target

SJ Kassinger, ML van Hoek - Synthetic and systems biotechnology, 2020 - Elsevier
Synthetic biologists are exploiting biofilms as an effective mechanism for producing various
outputs. Metabolic optimization has become commonplace as a method of maximizing …

Blue light-mediated transcriptional activation and repression of gene expression in bacteria

P Jayaraman, K Devarajan, TK Chua… - Nucleic acids …, 2016 - academic.oup.com
Light-regulated modules offer unprecedented new ways to control cellular behavior in
precise spatial and temporal resolution. The availability of such tools may dramatically …

Social interactions in bacterial cell–cell signaling

KL Asfahl, M Schuster - FEMS Microbiology Reviews, 2017 - academic.oup.com
Cooperation and conflict in microorganisms is being recognized as an important factor in the
organization and function of microbial communities. Many of the cooperative behaviors …

Inducible cell-to-cell signaling for tunable dynamics in microbial communities

A Miano, MJ Liao, J Hasty - Nature communications, 2020 - nature.com
The last decade has seen bacteria at the forefront of biotechnological innovation, with
applications including biomolecular computing, living therapeutics, microbiome engineering …

Rational engineering of synthetic microbial systems: from single cells to consortia

P Bittihn, MO Din, LS Tsimring, J Hasty - Current opinion in microbiology, 2018 - Elsevier
Highlights•Synthetic biology approaches enable microbial systems engineering.•Versatile
tools rapidly expand regulatory engineering capabilities.•Modular components and …

Toward synthetic plant development

JAN Brophy - Plant Physiology, 2022 - academic.oup.com
The ability to engineer plant form will enable the production of novel agricultural products
designed to tolerate extreme stresses, boost yield, reduce waste, and improve …