Spatio-temporal dynamics of Plasmodium falciparum transmission within a spatial unit on the Colombian Pacific Coast

A Knudson, F González-Casabianca… - Scientific reports, 2020 - nature.com
As malaria control programmes concentrate their efforts towards malaria elimination a better
understanding of malaria transmission patterns at fine spatial resolution units becomes …

Resting-state fMRI functional connectivity: Big data preprocessing pipelines and topological data analysis

A Phinyomark, E Ibanez-Marcelo… - IEEE Transactions on …, 2017 - ieeexplore.ieee.org
Resting state functional magnetic resonance imaging (rfMRI) can be used to measure
functional connectivity and then identify brain networks and related brain disorders and …

[HTML][HTML] Unified topological inference for brain networks in temporal lobe epilepsy using the Wasserstein distance

MK Chung, CG Ramos, FB De Paiva, J Mathis… - NeuroImage, 2023 - Elsevier
Persistent homology offers a powerful tool for extracting hidden topological signals from
brain networks. It captures the evolution of topological structures across multiple scales …

From mathematics to medicine: A practical primer on topological data analysis (TDA) and the development of related analytic tools for the functional discovery of latent …

A Salch, A Regalski, H Abdallah, R Suryadevara… - PloS one, 2021 - journals.plos.org
fMRI is the preeminent method for collecting signals from the human brain in vivo, for using
these signals in the service of functional discovery, and relating these discoveries to …

Percolation on simplicial complexes

D Zhao, R Li, H Peng, M Zhong, W Wang - Applied Mathematics and …, 2022 - Elsevier
From human communications to ecological systems, higher-order networks are ubiquitous in
our society. The study of their dynamic processes using percolation theory has attracted …

Demonstration of topological data analysis on a quantum processor

HL Huang, XL Wang, PP Rohde, YH Luo, YW Zhao… - Optica, 2018 - opg.optica.org
Topological data analysis offers a robust way to extract useful information from noisy,
unstructured data by identifying its underlying structure. Recently, an efficient quantum …

Cholinergic neuromodulation of inhibitory interneurons facilitates functional integration in whole-brain models

C Coronel-Oliveros, R Cofré, P Orio - PLoS Computational …, 2021 - journals.plos.org
Segregation and integration are two fundamental principles of brain structural and functional
organization. Neuroimaging studies have shown that the brain transits between different …

Strud: Truss decomposition of simplicial complexes

G Preti, G De Francisci Morales, F Bonchi - Proceedings of the Web …, 2021 - dl.acm.org
A simplicial complex is a generalization of a graph: a collection of n-ary relationships
(instead of binary as the edges of a graph), named simplices. In this paper, we develop a …

Simplex2vec embeddings for community detection in simplicial complexes

JCW Billings, M Hu, G Lerda, AN Medvedev… - arXiv preprint arXiv …, 2019 - arxiv.org
Topological representations are rapidly becoming a popular way to capture and encode
higher-order interactions in complex systems. They have found applications in disciplines as …

A novel simplicial complex representation of social media texts: The case of Twitter

Y Ghahremani, B Amiri - Chaos, Solitons & Fractals, 2023 - Elsevier
With the rise in technological advances in the last decades, there has been an increase in
the complexity of the many systems that we are members of. The emergence and …