From Rags to Riches: Exploiting the Calvin‐Benson‐Bassham Cycle for Biomanufacturing
Industrial chemical production largely relies on fossil fuels, resulting in the unavoidable
release of carbon dioxide (CO2) into the atmosphere. The concept of a circular carbon …
release of carbon dioxide (CO2) into the atmosphere. The concept of a circular carbon …
Recombinant Pseudomonas growing on non-natural fluorinated substrates shows stress but overall tolerance to cytoplasmically released fluoride anion
AG Dodge, CJ Thoma, MR O'Connor, LP Wackett - Mbio, 2024 - Am Soc Microbiol
Microbial response to toxic fluoride anion has traditionally been studied by adding inorganic
fluoride salts to growth media. Fluoride is known to spontaneously transit the membrane as …
fluoride salts to growth media. Fluoride is known to spontaneously transit the membrane as …
The pAblo· pCasso self-curing vector toolset for unconstrained cytidine and adenine base-editing in Gram-negative bacteria
E Kozaeva, ZS Nielsen… - Nucleic acids …, 2024 - academic.oup.com
A synthetic biology toolkit, exploiting clustered regularly interspaced short palindromic
repeats (CRISPR) and modified CRISPR-associated protein (Cas) base-editors, was …
repeats (CRISPR) and modified CRISPR-associated protein (Cas) base-editors, was …
Recursive genome engineering decodes the evolutionary origin of an essential thymidylate kinase activity in Pseudomonas putida KT2440
Thymidylate kinases (TMPKs) play an essential role in DNA biosynthesis across all domains
of life by catalyzing dTMP phosphorylation to dTDP. In Pseudomonas putida KT2440, a …
of life by catalyzing dTMP phosphorylation to dTDP. In Pseudomonas putida KT2440, a …
[HTML][HTML] Saccharomyces boulardii promoters for control of gene expression in vivo
C Sands, KA Hedin, R Vazquez-Uribe… - Microbial Cell …, 2024 - Springer
Background Interest in the use of engineered microbes to deliver therapeutic activities has
increased in recent years. The probiotic yeast Saccharomyces boulardii has been …
increased in recent years. The probiotic yeast Saccharomyces boulardii has been …
Engineering the carbon and redox metabolism of Paenibacillus polymyxa for efficient isobutanol production
Paenibacillus polymyxa is a non‐pathogenic, Gram‐positive bacterium endowed with a rich
and versatile metabolism. However interesting, this bacterium has been seldom used for …
and versatile metabolism. However interesting, this bacterium has been seldom used for …
[HTML][HTML] Deciphering Nutritional Stress Responses via Knowledge-Enriched Transcriptomics for Microbial Engineering
Understanding diverse bacterial nutritional requirements and responses is foundational in
microbial research and biotechnology. In this study, we employed knowledge-enriched …
microbial research and biotechnology. In this study, we employed knowledge-enriched …
[HTML][HTML] Time-resolved, deuterium-based fluxomics uncovers the hierarchy and dynamics of sugar processing by Pseudomonas putida
Pseudomonas putida, a microbial host widely adopted for metabolic engineering, processes
glucose through convergent peripheral pathways that ultimately yield 6-phosphogluconate …
glucose through convergent peripheral pathways that ultimately yield 6-phosphogluconate …
[HTML][HTML] BactEXTRACT: an R Shiny app to quickly extract, plot and analyse bacterial growth and gene expression data
J Dénéréaz, JW Veening - Access Microbiology, 2024 - microbiologyresearch.org
To streamline the analysis and visualization of bacterial growth and gene expression data
obtained by microtitre plate readers, we developed BactEXTRACT, an intuitive, easy-to-use …
obtained by microtitre plate readers, we developed BactEXTRACT, an intuitive, easy-to-use …
[HTML][HTML] Dashing Growth Curves: a web application for rapid and interactive analysis of microbial growth curves
MA Reiter, JA Vorholt - BMC bioinformatics, 2024 - Springer
Background Recording and analyzing microbial growth is a routine task in the life sciences.
Microplate readers that record dozens to hundreds of growth curves simultaneously are …
Microplate readers that record dozens to hundreds of growth curves simultaneously are …