[HTML][HTML] Dynamics of DNA methylation and its functions in plant growth and development

S Kumar, T Mohapatra - Frontiers in Plant Science, 2021 - frontiersin.org
Epigenetic modifications in DNA bases and histone proteins play important roles in the
regulation of gene expression and genome stability. Chemical modification of DNA base …

Metagenomic sequencing for microbial DNA in human samples: emerging technological advances

Y Shi, G Wang, HCH Lau, J Yu - International journal of molecular …, 2022 - mdpi.com
Whole genome metagenomic sequencing is a powerful platform enabling the simultaneous
identification of all genes from entirely different kingdoms of organisms in a complex sample …

[HTML][HTML] The emergence of parvoviruses of carnivores

K Hoelzer, CR Parrish - Veterinary research, 2010 - ncbi.nlm.nih.gov
The emergence of canine parvovirus (CPV) represents a well-documented example
highlighting the emergence of a new virus through cross-species transmission. CPV …

[HTML][HTML] Recommendations for the introduction of metagenomic high-throughput sequencing in clinical virology, part I: Wet lab procedure

FX López-Labrador, JR Brown, N Fischer… - Journal of Clinical …, 2021 - Elsevier
Metagenomic high-throughput sequencing (mHTS) is a hypothesis-free, universal pathogen
detection technique for determination of the DNA/RNA sequences in a variety of sample …

Functions and malfunctions of mammalian DNA-cytosine deaminases

SU Siriwardena, K Chen, AS Bhagwat - Chemical reviews, 2016 - ACS Publications
The AID/APOBEC family enzymes convert cytosines in single-stranded DNA to uracils,
causing base substitutions and strand breaks. They are induced by cytokines produced …

[HTML][HTML] Roles of APOBEC3A and APOBEC3B in human papillomavirus infection and disease progression

CJ Warren, JA Westrich, KV Doorslaer, D Pyeon - Viruses, 2017 - mdpi.com
The apolipoprotein B messenger RNA-editing, enzyme-catalytic, polypeptide-like 3
(APOBEC3) family of cytidine deaminases plays an important role in the innate immune …

Virus-Host Coevolution: Common Patterns of Nucleotide Motif Usage in Flaviviridae and Their Hosts

FP Lobo, BEF Mota, SDJ Pena, V Azevedo… - PloS one, 2009 - journals.plos.org
Virus-host biological interaction is a continuous coevolutionary process involving both host
immune system and viral escape mechanisms. Flaviviridae family is composed of fast …

[HTML][HTML] Ranaviruses and other members of the family Iridoviridae: Their place in the virosphere

VG Chinchar, TB Waltzek, K Subramaniam - Virology, 2017 - Elsevier
Members of the family Iridoviridae, collectively referred to as iridovirids, are large, double-
stranded DNA-containing viruses that infect invertebrates and cold-blooded (ectothermic) …

The functions of DNA methylation by CcrM in Caulobacter crescentus: a global approach

D Gonzalez, JB Kozdon, HH McAdams… - Nucleic acids …, 2014 - academic.oup.com
DNA methylation is involved in a diversity of processes in bacteria, including maintenance of
genome integrity and regulation of gene expression. Here, using Caulobacter crescentus as …

[HTML][HTML] Roving methyltransferases generate a mosaic epigenetic landscape and influence evolution in Bacteroides fragilis group

MJ Tisza, DDN Smith, AE Clark, JH Youn… - Nature …, 2023 - nature.com
Three types of DNA methyl modifications have been detected in bacterial genomes, and
mechanistic studies have demonstrated roles for DNA methylation in physiological functions …