CRISPRi-seq for genome-wide fitness quantification in bacteria
CRISPR interference (CRISPRi) is a powerful tool to link essential and nonessential genes
to specific phenotypes and to explore their functions. Here we describe a protocol for …
to specific phenotypes and to explore their functions. Here we describe a protocol for …
[HTML][HTML] Genome-scale CRISPRi screening: a powerful tool in engineering microbiology
L Sun, P Zheng, J Sun, VF Wendisch, Y Wang - Engineering Microbiology, 2023 - Elsevier
Deciphering gene function is fundamental to engineering of microbiology. The clustered
regularly interspaced short palindromic repeats (CRISPR) system has been adapted for …
regularly interspaced short palindromic repeats (CRISPR) system has been adapted for …
A genome‐scale yeast library with inducible expression of individual genes
The ability to switch a gene from off to on and monitor dynamic changes provides a powerful
approach for probing gene function and elucidating causal regulatory relationships. Here …
approach for probing gene function and elucidating causal regulatory relationships. Here …
Design of four small-molecule-inducible systems in the yeast chromosome, applied to optimize terpene biosynthesis
The optimization of cellular functions often requires the balancing of gene expression, but
the physical construction and screening of alternative designs are costly and time …
the physical construction and screening of alternative designs are costly and time …
Progress in Gene Editing and Metabolic Regulation of Saccharomyces cerevisiae with CRISPR/Cas9 Tools
Y Liang, S Gao, X Qi, LN Valentovich… - ACS Synthetic …, 2024 - ACS Publications
The CRISPR/Cas9 systems have been developed as tools for genetic engineering and
metabolic engineering in various organisms. In this review, various aspects of CRISPR/Cas9 …
metabolic engineering in various organisms. In this review, various aspects of CRISPR/Cas9 …
Development and applications of a CRISPR activation system for facile genetic overexpression in Candida albicans
NC Gervais, AA La Bella, LF Wensing, J Sharma… - G3, 2023 - academic.oup.com
For the fungal pathogen Candida albicans, genetic overexpression readily occurs via a
diversity of genomic alterations, such as aneuploidy and gain-of-function mutations, with …
diversity of genomic alterations, such as aneuploidy and gain-of-function mutations, with …
[HTML][HTML] A genome-scale CRISPR interference guide library enables comprehensive phenotypic profiling in yeast
NJ McGlincy, ZA Meacham, KK Reynaud, R Muller… - BMC genomics, 2021 - Springer
Background CRISPR/Cas9-mediated transcriptional interference (CRISPRi) enables
programmable gene knock-down, yielding loss-of-function phenotypes for nearly any gene …
programmable gene knock-down, yielding loss-of-function phenotypes for nearly any gene …
[HTML][HTML] From Saccharomyces cerevisiae to Ethanol: Unlocking the Power of Evolutionary Engineering in Metabolic Engineering Applications
A Topaloğlu, Ö Esen, B Turanlı-Yıldız, M Arslan… - Journal of Fungi, 2023 - mdpi.com
Increased human population and the rapid decline of fossil fuels resulted in a global
tendency to look for alternative fuel sources. Environmental concerns about fossil fuel …
tendency to look for alternative fuel sources. Environmental concerns about fossil fuel …
Yca1 metacaspase: diverse functions determine how yeast live and let die
DK Lam, G Sherlock - FEMS Yeast Research, 2023 - academic.oup.com
The Yca1 metacaspase was discovered due to its role in the regulation of apoptosis in
Saccharomyces cerevisiae. However, the mechanisms that drive apoptosis in yeast remain …
Saccharomyces cerevisiae. However, the mechanisms that drive apoptosis in yeast remain …
A CRISPR interference screen of essential genes reveals that proteasome regulation dictates acetic acid tolerance in Saccharomyces cerevisiae
ABSTRACT CRISPR interference (CRISPRi) is a powerful tool to study cellular physiology
under different growth conditions, and this technology provides a means for screening …
under different growth conditions, and this technology provides a means for screening …