From correlation to causation: analysis of metabolomics data using systems biology approaches
Introduction Metabolomics is a well-established tool in systems biology, especially in the top–
down approach. Metabolomics experiments often results in discovery studies that provide …
down approach. Metabolomics experiments often results in discovery studies that provide …
The role of metabolites and metabolomics in clinically applicable biomarkers of disease
Metabolomics allows the simultaneous and relative quantification of thousands of different
metabolites within a given sample using sensitive and specific methodologies such as gas …
metabolites within a given sample using sensitive and specific methodologies such as gas …
High-sensitivity analytical approaches for the structural characterization of glycoproteins
1.1. General Considerations Structural intricacies of carbohydrate molecules and their
propensity to form varied linkages, substitutions, and branching patterns have fascinated …
propensity to form varied linkages, substitutions, and branching patterns have fascinated …
Nitrogen assimilation in Escherichia coli: putting molecular data into a systems perspective
WC van Heeswijk, HV Westerhoff… - … and Molecular Biology …, 2013 - Am Soc Microbiol
We present a comprehensive overview of the hierarchical network of intracellular processes
revolving around central nitrogen metabolism in Escherichia coli. The hierarchy intertwines …
revolving around central nitrogen metabolism in Escherichia coli. The hierarchy intertwines …
Protocol: a fast, comprehensive and reproducible one-step extraction method for the rapid preparation of polar and semi-polar metabolites, lipids, proteins, starch and …
MA Salem, J Jüppner, K Bajdzienko, P Giavalisco - Plant Methods, 2016 - Springer
Background The elucidation of complex biological systems requires integration of multiple
molecular parameters. Accordingly, high throughput methods like transcriptomics …
molecular parameters. Accordingly, high throughput methods like transcriptomics …
Simultaneous tracking of autophagy and oxidative stress during stroke with an ICT-TBET integrated ratiometric two-photon platform
W Hu, T Qiang, L Chai, T Liang, L Ren, F Cheng… - Chemical …, 2022 - pubs.rsc.org
Over recent years, fluorescent probes exhibiting simultaneous responses to multiple targets
have been developed for in situ, real-time monitoring of cellular metabolism using two …
have been developed for in situ, real-time monitoring of cellular metabolism using two …
[HTML][HTML] Variability in cardiac electrophysiology: using experimentally-calibrated populations of models to move beyond the single virtual physiological human …
Physiological variability manifests itself via differences in physiological function between
individuals of the same species, and has crucial implications in disease progression and …
individuals of the same species, and has crucial implications in disease progression and …
A bioinformatics view of zinc enzymes
C Andreini, I Bertini - Journal of inorganic biochemistry, 2012 - Elsevier
Thanks to the contributions of scientists like Bert Vallee, zinc enzymology is an area of
research with a rich history and a strong basis of biochemical and biophysical knowledge. In …
research with a rich history and a strong basis of biochemical and biophysical knowledge. In …
Stochastic mechano-chemical kinetics of molecular motors: a multidisciplinary enterprise from a physicist's perspective
D Chowdhury - Physics Reports, 2013 - Elsevier
A molecular motor is made of either a single macromolecule or a macromolecular complex.
Just like their macroscopic counterparts, molecular motors “transduce” input energy into …
Just like their macroscopic counterparts, molecular motors “transduce” input energy into …
Phenotypic models of T cell activation
M Lever, PK Maini, PA Van Der Merwe… - Nature Reviews …, 2014 - nature.com
T cell activation is a crucial checkpoint in adaptive immunity, and this activation depends on
the binding parameters that govern the interactions between T cell receptors (TCRs) and …
the binding parameters that govern the interactions between T cell receptors (TCRs) and …