[HTML][HTML] Computational single cell oncology: state of the art
E Paas-Oliveros, E Hernández-Lemus… - Frontiers in …, 2023 - frontiersin.org
Single cell computational analysis has emerged as a powerful tool in the field of oncology,
enabling researchers to decipher the complex cellular heterogeneity that characterizes …
enabling researchers to decipher the complex cellular heterogeneity that characterizes …
Multiscale engineering of brain organoids for disease modeling
C Xu, A Alameri, W Leong, E Johnson, Z Chen… - Advanced Drug Delivery …, 2024 - Elsevier
Brain organoids hold great potential for modeling human brain development and
pathogenesis. They recapitulate certain aspects of the transcriptional trajectory, cellular …
pathogenesis. They recapitulate certain aspects of the transcriptional trajectory, cellular …
[HTML][HTML] A comparison of marker gene selection methods for single-cell RNA sequencing data
JM Pullin, DJ McCarthy - Genome Biology, 2024 - Springer
Background The development of single-cell RNA sequencing (scRNA-seq) has enabled
scientists to catalog and probe the transcriptional heterogeneity of individual cells in …
scientists to catalog and probe the transcriptional heterogeneity of individual cells in …
Deciphering cell types by integrating scATAC-seq data with genome sequences
Y Zeng, M Luo, N Shangguan, P Shi, J Feng… - Nature Computational …, 2024 - nature.com
The single-cell assay for transposase-accessible chromatin using sequencing (scATAC-seq)
technology provides insight into gene regulation and epigenetic heterogeneity at single-cell …
technology provides insight into gene regulation and epigenetic heterogeneity at single-cell …
[HTML][HTML] Generation of human cerebral organoids with a structured outer subventricular zone
RM Walsh, R Luongo, E Giacomelli, G Ciceri… - Cell Reports, 2024 - cell.com
Outer radial glia (oRG) emerge as cortical progenitor cells that support the development of
an enlarged outer subventricular zone (oSVZ) and the expansion of the neocortex. The in …
an enlarged outer subventricular zone (oSVZ) and the expansion of the neocortex. The in …
[HTML][HTML] Single-cell assignment using multiple-adversarial domain adaptation network with large-scale references
The rapid accumulation of single-cell RNA-seq data has provided rich resources to
characterize various human cell populations. However, achieving accurate cell-type …
characterize various human cell populations. However, achieving accurate cell-type …
Single-cell RNA sequencing of human tissue supports successful drug targets.
Early characterization of drug targets associated with disease can greatly reduce clinical
failures attributed to lack of safety or efficacy. As single-cell RNA sequencing (scRNA-seq) of …
failures attributed to lack of safety or efficacy. As single-cell RNA sequencing (scRNA-seq) of …
[HTML][HTML] Publication, funding, and experimental data in support of Human Reference Atlas construction and usage
Y Kong, K Börner - Scientific Data, 2024 - nature.com
Experts from 18 consortia are collaborating on the Human Reference Atlas (HRA) which
aims to map the 37 trillion cells in the healthy human body. Information relevant for HRA …
aims to map the 37 trillion cells in the healthy human body. Information relevant for HRA …
[HTML][HTML] Decoding the transcriptional heterogeneity, differentiation lineage, clinical significance in tissue-resident memory CD8 T cell of the small intestine by single …
J Fang, J Lei, B He, Y Wu, P Chen, Z Sun, N Wu… - Journal of Translational …, 2024 - Springer
Resident memory T (Trm) cells which are specifically located in non-lymphoid tissues
showed distinct phenotypes and functions compared to circulating memory T cells and were …
showed distinct phenotypes and functions compared to circulating memory T cells and were …
Human BioMolecular Atlas Program (HuBMAP): 3D Human Reference Atlas Construction and Usage
Abstract The Human BioMolecular Atlas Program (HuBMAP) aims to construct a reference
3D structural, cellular, and molecular atlas of the healthy adult human body. The HuBMAP …
3D structural, cellular, and molecular atlas of the healthy adult human body. The HuBMAP …