Current developments in activity-based protein profiling

LI Willems, HS Overkleeft… - Bioconjugate …, 2014 - ACS Publications
Activity-based protein profiling (ABPP) has emerged as a powerful strategy to study the
activity of enzymes in complex proteomes. The aim of ABPP is to selectively visualize only …

Recent advances in the development of synthetic chemical probes for glycosidase enzymes

HM Burke, T Gunnlaugsson, EM Scanlan - Chemical Communications, 2015 - pubs.rsc.org
The emergence of synthetic glycoconjugates as chemical probes for the detection of
glycosidase enzymes has resulted in the development of a range of useful chemical tools …

Potent and selective activity-based probes for GH27 human retaining α-galactosidases

LI Willems, TJM Beenakker, B Murray… - Journal of the …, 2014 - ACS Publications
Lysosomal degradation of glycosphingolipids is mediated by the consecutive action of
several glycosidases. Malfunctioning of one of these hydrolases can lead to a lysosomal …

From covalent glycosidase inhibitors to activity‐based glycosidase probes

LI Willems, J Jiang, KY Li, MD Witte… - … A European Journal, 2014 - Wiley Online Library
Activity‐based protein profiling has emerged as a powerful discovery tool in chemical
biology and medicinal chemistry research. Success of activity‐based protein profiling hinges …

Comparing Cyclophellitol N‐Alkyl and N‐Acyl Cyclophellitol Aziridines as Activity‐Based Glycosidase Probes

J Jiang, TJM Beenakker, WW Kallemeijn… - … A European Journal, 2015 - Wiley Online Library
The synthesis and evaluation as activity‐based probes (ABPs) of three configurationally
distinct, fluorescent N‐alkyl cyclophellitol aziridine isosteres for profiling GH1 β‐glucosidase …

Exploring functional cyclophellitol analogues as human retaining beta-glucosidase inhibitors

KY Li, J Jiang, MD Witte, WW Kallemeijn… - Organic & …, 2014 - pubs.rsc.org
The natural product, cyclophellitol and its aziridine analogue are potent mechanism-based
retaining β-glucosidase inhibitors. In this paper we explore the inhibitory potency of a …

[HTML][HTML] Advancing understanding of microbial bioenergy conversion processes by activity-based protein profiling

Y Liu, JK Fredrickson, NC Sadler… - Biotechnology for …, 2015 - Springer
The development of renewable biofuels is a global priority, but success will require novel
technologies that greatly improve our understanding of microbial systems biology. An …

A β-galactosidase probe for the detection of cellular senescence by mass cytometry

MA Lumba, LM Willis, S Santra, R Rana… - Organic & …, 2017 - pubs.rsc.org
Mass cytometry (MC) is a powerful method that combines the cellular resolution of flow
cytometry with the isotopic resolution of inductively coupled plasma mass spectrometry (ICP …

A Divergent Synthesis of larabino‐ and dxylo‐Configured Cyclophellitol Epoxides and Aziridines

SP Schröder, R Petracca, H Minnee… - European Journal of …, 2016 - Wiley Online Library
A divergent synthesis to eight d‐xylo‐and l‐arabino‐cyclophellitol and cyclophellitol
aziridine derivatives is described. The syntheses start from d‐xylose and feature asymmetric …

Ligand‐Controlled Stereoselective Synthesis and Biological Activity of 2‐Exomethylene Pseudo‐glycoconjugates: Discovery of Mincle‐Selective Ligands

T Ikazaki, E Ishikawa, H Tamashima… - Angewandte Chemie …, 2023 - Wiley Online Library
Glycoconjugate analogues in which the sp3‐hybridized C2 position of the carbohydrate
structure (normally bearing a hydroxy group) is converted into a compact sp2‐hybridized …