Transcriptomics, proteomics and interactomics: unique approaches to track the insights of bioremediation

OV Singh, NS Nagaraj - Briefings in Functional Genomics, 2006 - academic.oup.com
Microbial mediated bioremediation has a great potential to effectively restore contaminated
environment, but the lack of information about factors regulating the growth and metabolism …

Proteomics and metabolomics: The molecular make‐up of toxic aromatic pollutant bioremediation

OV Singh - Proteomics, 2006 - Wiley Online Library
Microbial‐mediated attenuation of toxic aromatic pollutants offers great potential for the
restoration of contaminated environments in an ecologically acceptable manner. However …

Peroxisomal Atg37 binds Atg30 or palmitoyl-CoA to regulate phagophore formation during pexophagy

TY Nazarko, K Ozeki, A Till, G Ramakrishnan… - Journal of Cell …, 2014 - rupress.org
Autophagy is a membrane trafficking pathway that sequesters proteins and organelles into
autophagosomes. The selectivity of this pathway is determined by autophagy receptors …

Identification of membrane proteins from mammalian cell/tissue using methanol-facilitated solubilization and tryptic digestion coupled with 2D-LC-MS/MS

J Blonder, KC Chan, HJ Issaq, TD Veenstra - Nature protocols, 2006 - nature.com
The core prerequisites for an efficient proteome-scale analysis of mammalian membrane
proteins are effective isolation, solubilization, digestion and multidimensional liquid …

Spit and venom from scytodes spiders: a diverse and distinct cocktail

PA Zobel-Thropp, SM Correa, JE Garb… - Journal of proteome …, 2014 - ACS Publications
Spiders from the family Scytodidae have a unique prey capturing technique: they spit a zig-
zagged silken glue to tether prey to a surface. Effectiveness of this sticky mixture is based on …

[HTML][HTML] Large scale chemical cross-linking mass spectrometry perspectives

BL Zybailov, GV Glazko, M Jaiswal… - Journal of proteomics & …, 2013 - ncbi.nlm.nih.gov
The spectacular heterogeneity of a complex protein mixture from biological samples
becomes even more difficult to tackle when one's attention is shifted towards different protein …

Effective microbial bioremediation via the multi-omics approach: An overview of trends, problems and prospects

YR Yunusa, ZD Umar - UMYU Journal of Microbiology Research …, 2021 - ujmr.umyu.edu.ng
Techno-industrial advancements the world over had led to the generation of hazardous
environmental pollutants. Microbial bioremediation offers the best alternative for the removal …

Bioinformatics and data mining in proteomics

A Haoudi, H Bensmail - Expert Review of Proteomics, 2006 - Taylor & Francis
Proteomic studies involve the identification as well as qualitative and quantitative
comparison of proteins expressed under different conditions, and elucidation of their …

Analysis of Complex Protein Mixtures with Improved Sequence Coverage Using (CE−MS/MS)n

S Garza, M Moini - Analytical chemistry, 2006 - ACS Publications
Identification of proteins, in a complex protein mixture, using one-dimensional high-
performance liquid chromatography tandem mass spectrometry (HPLC− MS/MS) analysis of …

Insight of proteomics and genomics in environmental bioremediation

RP Singh, G Manchanda, ZF Li… - Handbook of research on …, 2017 - igi-global.com
Bioremediation of hazardous substances from environment is a major human and
environmental health concern but can be managed by the microorganism due to their variety …