Phylogenomic and structural analyses of 18 complete plastomes across nearly all families of early-diverging eudicots, including an angiosperm-wide analysis of IR …

Y Sun, MJ Moore, S Zhang, PS Soltis, DE Soltis… - Molecular Phylogenetics …, 2016 - Elsevier
The grade of early-diverging eudicots includes five major lineages: Ranunculales,
Trochodendrales, Buxales, Proteales and Sabiaceae. To examine the evolution of plastome …

[HTML][HTML] Complete nucleotide sequence of the Cryptomeria japonicaD. Don. chloroplast genome and comparative chloroplast genomics: diversified genomic structure …

T Hirao, A Watanabe, M Kurita, T Kondo, K Takata - BMC plant biology, 2008 - Springer
Background The recent determination of complete chloroplast (cp) genomic sequences of
various plant species has enabled numerous comparative analyses as well as advances in …

Chloroplast genomes of two conifers lack a large inverted repeat and are extensively rearranged.

SH Strauss, JD Palmer, GT Howe… - Proceedings of the …, 1988 - National Acad Sciences
Chloroplast genomes of Douglas-fir [Pseudotsuga menziesii (Mirb.) Franco] and radiata
(Monterey) pine [Pinus radiata D. Don], two conifers from the widespread Pinaceae, were …

[HTML][HTML] Comparative analysis of mitochondrial genomes of Broussonetia spp. (Moraceae) reveals heterogeneity in structure, synteny, intercellular gene transfer, and …

C Lai, J Wang, S Kan, S Zhang, P Li… - Frontiers in plant …, 2022 - frontiersin.org
The genus Broussonetia (Moraceae) is comprised of three non-hybrid recognized species
that all produce high quality fiber essential in the development of papermaking and …

[HTML][HTML] Structural variation of plastomes provides key insight into the deep phylogeny of ferns

XY Du, LY Kuo, ZY Zuo, DZ Li, JM Lu - Frontiers in Plant Science, 2022 - frontiersin.org
Structural variation of plastid genomes (plastomes), particularly large inversions and gene
losses, can provide key evidence for the deep phylogeny of plants. In this study, we …

Chloroplast DNA from lettuce and Barnadesia (Asteraceae): structure, gene localization, and characterization of a large inversion

RK Jansen, JD Palmer - Current Genetics, 1987 - Springer
We have cloned into plasmids 17 of 18 lettuce chloroplast DNA SacI fragments covering
96% of the genome. The cloned fragments were used to construct cleavage maps for 10 …

How to measure somaclonal variation

GJ De Klerk - Acta Botanica Neerlandica, 1990 - natuurtijdschriften.nl
Plants are generated by a series of cell divisions in meristematic tissues. The apical
meristem is formed during the early stages of embryogenesis and consists of two outer cell …

Plastome evolution and phylogenetic relationships among Malvaceae subfamilies

JH Wang, MJ Moore, H Wang, ZX Zhu, HF Wang - Gene, 2021 - Elsevier
Malvaceae sl is the largest family of Malvales, comprising more than 4225 species. Within
Malvaceae, the phylogenetic relationships among subfamilies remain controversial. To …

Expansion and contraction of the chloroplast inverted repeat in Apiaceae subfamily Apioideae

GM Plunkett, SR Downie - Systematic Botany, 2000 - BioOne
Chloroplast DNA (cpDNA) restriction site maps for 113 species of Apiaceae (Umbelliferae)
and the allied families Araliaceae and Pittosporaceae were constructed for two enzymes …

Evolutionary significance of inversions in legume chloroplast DNAs

JD Palmer, B Osorio, WF Thompson - Current Genetics, 1988 - Springer
Cloned genes from tobacco, spinach, and pea were used as hybridization probes to localize
36 protein genes on the chloroplast chromosomes of four legumes—mung bean, common …