[HTML][HTML] Recognition of seven species in the Cryptococcus gattii/Cryptococcus neoformans species complex

F Hagen, K Khayhan, B Theelen, A Kolecka… - Fungal genetics and …, 2015 - Elsevier
Phylogenetic analysis of 11 genetic loci and results from many genotyping studies revealed
significant genetic diversity with the pathogenic Cryptococcus gattii/Cryptococcus …

Cryptococcus neoformans and Cryptococcus gattii, the etiologic agents of cryptococcosis

KJ Kwon-Chung, JA Fraser… - Cold Spring …, 2014 - perspectivesinmedicine.cshlp.org
Cryptococcus neoformans and Cryptococcus gattii are the two etiologic agents of
cryptococcosis. They belong to the phylum Basidiomycota and can be readily distinguished …

A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data

JW Spatafora, Y Chang, GL Benny, K Lazarus… - Mycologia, 2016 - Taylor & Francis
Zygomycete fungi were classified as a single phylum, Zygomycota, based on sexual
reproduction by zygospores, frequent asexual reproduction by sporangia, absence of …

Improved prediction of fungal effector proteins from secretomes with EffectorP 2.0

J Sperschneider, PN Dodds… - Molecular plant …, 2018 - Wiley Online Library
Plant‐pathogenic fungi secrete effector proteins to facilitate infection. We describe extensive
improvements to EffectorP, the first machine learning classifier for fungal effector prediction …

Plant-polysaccharide-degrading enzymes from basidiomycetes

J Rytioja, K Hildén, J Yuzon, A Hatakka… - Microbiology and …, 2014 - Am Soc Microbiol
Basidiomycete fungi subsist on various types of plant material in diverse environments, from
living and dead trees and forest litter to crops and grasses and to decaying plant matter in …

[HTML][HTML] Diverse Lifestyles and Strategies of Plant Pathogenesis Encoded in the Genomes of Eighteen Dothideomycetes Fungi

RA Ohm, N Feau, B Henrissat, CL Schoch… - PLoS …, 2012 - journals.plos.org
The class Dothideomycetes is one of the largest groups of fungi with a high level of
ecological diversity including many plant pathogens infecting a broad range of hosts. Here …

[HTML][HTML] Widespread polycistronic transcripts in fungi revealed by single-molecule mRNA sequencing

SP Gordon, E Tseng, A Salamov, J Zhang, X Meng… - PloS one, 2015 - journals.plos.org
Genes in prokaryotic genomes are often arranged into clusters and co-transcribed into
polycistronic RNAs. Isolated examples of polycistronic RNAs were also reported in some …

[HTML][HTML] Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina)

D Martinez, RM Berka, B Henrissat, M Saloheimo… - Nature …, 2008 - nature.com
Trichoderma reesei is the main industrial source of cellulases and hemicellulases used to
depolymerize biomass to simple sugars that are converted to chemical intermediates and …

[HTML][HTML] Genome sequence of the model mushroom Schizophyllum commune

RA Ohm, JF De Jong, LG Lugones, A Aerts… - Nature …, 2010 - nature.com
Much remains to be learned about the biology of mushroom-forming fungi, which are an
important source of food, secondary metabolites and industrial enzymes. The wood …

[HTML][HTML] Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis

J Kämper, R Kahmann, M Bölker, LJ Ma, T Brefort… - Nature, 2006 - nature.com
Ustilago maydis is a ubiquitous pathogen of maize and a well-established model organism
for the study of plant–microbe interactions. This basidiomycete fungus does not use …