RNA-targeting CRISPR–Cas systems

SPB van Beljouw, J Sanders… - Nature Reviews …, 2023 - nature.com
CRISPR–Cas is a widespread adaptive immune system in bacteria and archaea that
protects against viral infection by targeting specific invading nucleic acid sequences …

[HTML][HTML] Chemistry of Class 1 CRISPR-Cas effectors: Binding, editing, and regulation

TY Liu, JA Doudna - Journal of Biological Chemistry, 2020 - ASBMB
Among the multiple antiviral defense mechanisms found in prokaryotes, CRISPR-Cas
systems stand out as the only known RNA-programmed pathways for detecting and …

[PDF][PDF] Allosteric control of type IA CRISPR-Cas3 complexes and establishment as effective nucleic acid detection and human genome editing tools

C Hu, D Ni, KH Nam, S Majumdar, J McLean… - Molecular cell, 2022 - cell.com
Summary Type I CRISPR-Cas systems typically rely on a two-step process to degrade DNA.
First, an RNA-guided complex named Cascade identifies the complementary DNA target …

[PDF][PDF] Type III CRISPR-Cas provides resistance against nucleus-forming jumbo phages via abortive infection

D Mayo-Muñoz, LM Smith, C Garcia-Doval, LM Malone… - Molecular cell, 2022 - cell.com
Bacteria have diverse defenses against phages. In response, jumbo phages evade multiple
DNA-targeting defenses by protecting their DNA inside a nucleus-like structure. We …

Evolutionary and functional classification of the CARF domain superfamily, key sensors in prokaryotic antivirus defense

KS Makarova, A Timinskas, YI Wolf… - Nucleic acids …, 2020 - academic.oup.com
Abstract CRISPR-associated Rossmann Fold (CARF) and S MODS-a ssociated and fused to
v arious e ffector d omains (SAVED) are key components of c yclic oligonucleotide-b ased a …

Specificity and sensitivity of an RNA targeting type III CRISPR complex coupled with a NucC endonuclease effector

S Grüschow, CS Adamson, MF White - Nucleic acids research, 2021 - academic.oup.com
Type III CRISPR systems detect invading RNA, resulting in the activation of the enzymatic
Cas10 subunit. The Cas10 cyclase domain generates cyclic oligoadenylate (cOA) second …

[HTML][HTML] RNA targeting unleashes indiscriminate nuclease activity of CRISPR–Cas12a2

JPK Bravo, T Hallmark, B Naegle, CL Beisel… - Nature, 2023 - nature.com
Cas12a2 is a CRISPR-associated nuclease that performs RNA-guided, sequence-
nonspecific degradation of single-stranded RNA, single-stranded DNA and double-stranded …

[HTML][HTML] Type III CRISPR-Cas: beyond the Cas10 effector complex

G Stella, L Marraffini - Trends in Biochemical Sciences, 2023 - cell.com
Abstract Type III CRISPR-Cas loci encode some of the most abundant, yet complex, immune
systems of prokaryotes. They are composed of a Cas10 complex that uses an RNA guide to …

[HTML][HTML] CRISPR: History and perspectives to the future

Z Kozovska, S Rajcaniova, P Munteanu… - Biomedicine & …, 2021 - Elsevier
This review summarizes the information about the history and future of the CRISPR/Cas9
method. Genome editing can be perceived as a group of technologies that allow scientists to …

The diverse arsenal of type III CRISPR–Cas-associated CARF and SAVED effectors

JA Steens, CRP Salazar… - Biochemical Society …, 2022 - portlandpress.com
Type III CRISPR–Cas systems make use of a multi-subunit effector complex to target foreign
(m) RNA transcripts complementary to the guide/CRISPR RNA (crRNA). Base-pairing of the …