Recent advances in bioprobes and biolabels based on cyanine dyes

X Ma, L Shi, B Zhang, L Liu, Y Fu, X Zhang - Analytical and bioanalytical …, 2022 - Springer
As a functional dye, cyanine dye promotes the widespread application of bioprobes in the
fields of medicine, genetics and environment, owing to its advantages of good photophysical …

[HTML][HTML] Photonics of trimethine cyanine dyes as probes for biomolecules

PG Pronkin, AS Tatikolov - Molecules, 2022 - mdpi.com
Cyanine dyes are widely used as fluorescent probes in biophysics and medical biochemistry
due to their unique photophysical and photochemical properties (their photonics). This …

Molecular structure, DNA binding mode, photophysical properties and recommendations for use of SYBR Gold

PJ Kolbeck, W Vanderlinden… - Nucleic acids …, 2021 - academic.oup.com
SYBR Gold is a commonly used and particularly bright fluorescent DNA stain, however, its
chemical structure is unknown and its binding mode to DNA remains controversial. Here, we …

Highly selective acridinium based cyanine dyes for the detection of DNA base pairs (adenine, cytosine, guanine and thymine)

H Sajid, K Ayub, M Arshad, T Mahmood - Computational and Theoretical …, 2019 - Elsevier
In the current study, the DFT calculations are performed to investigate the binding properties
of nonsymmetric cyanine dyes (1a, 1b, 1c and 1d) for DNA base pairs. The effect of change …

[HTML][HTML] N-aryl pyrido cyanine derivatives are nuclear and organelle DNA markers for two-photon and super-resolution imaging

K Uno, N Sugimoto, Y Sato - Nature Communications, 2021 - nature.com
Live cell imaging using fluorescent DNA markers are an indispensable molecular tool in
various biological and biomedical fields. It is a challenge to develop DNA probes that avoid …

A colorimetric and fluorometric based dual readout approach for effective heparin sensing

SP Pandey, P Jha, PK Singh - International journal of biological …, 2021 - Elsevier
Devising fluorescence-based turn-on probes for the specific and sensitive detection of
Heparin is of utmost clinical importance. In this contribution, we have identified a molecular …

An ultrasensitive and selective method for visual detection of heparin in 100% human plasma

SP Pandey, P Jha, PK Singh - Talanta, 2023 - Elsevier
Designing sensors for the visual and rapid sensing of the most widely used blood
anticoagulant, Heparin, is essential, but yet remains quite a challenging task. Herein, we …

Classical thiazole orange and its regioisomer as fluorogenic probes for nucleolar RNA imaging in living cells

M He, Y Sato, S Nishizawa - Analyst, 2023 - pubs.rsc.org
In contrast to well-established DNA-selective dyes for live cell imaging, RNA-selective dyes
have been less developed owing to the challenges of making small molecules have RNA …

Spin–Orbit Coupling Calculation Combined with the Reference Interaction Site Model Self-Consistent Field Explicitly Including Constrained Spatial Electron Density …

K Suda, D Yokogawa - Journal of Chemical Theory and …, 2022 - ACS Publications
Studying the radiative and non-radiative decay processes of molecules in a solution is an
important issue in the design of organic and functional molecules. Theoretical approaches …

A cyanine based dicationic molecular rotor probe for dual sensing of heparin

SP Pandey, P Jha, PK Singh - Journal of Molecular Liquids, 2021 - Elsevier
Considering the clinical importance of Heparin in anticoagulant therapy, intensive efforts
have been devoted to develop optical sensor systems for the specific and sensitive detection …