A review of long‐branch attraction
J Bergsten - Cladistics, 2005 - Wiley Online Library
The history of long‐branch attraction, and in particular methods suggested to detect and
avoid the artifact to date, is reviewed. Methods suggested to avoid LBA‐artifacts include …
avoid the artifact to date, is reviewed. Methods suggested to avoid LBA‐artifacts include …
The mitochondrial DNA of land plants: peculiarities in phylogenetic perspective
V Knoop - Current genetics, 2004 - Springer
Land plants exhibit a significant evolutionary plasticity in their mitochondrial DNA (mtDNA),
which contrasts with the more conservative evolution of their chloroplast genomes. Frequent …
which contrasts with the more conservative evolution of their chloroplast genomes. Frequent …
The flowers in extant basal angiosperms and inferences on ancestral flowers
PK Endress - International Journal of Plant Sciences, 2001 - journals.uchicago.edu
This is a combination of a review and original data on floral structure, development, and
biology of representatives of all families of the ANITA grade and, in addition …
biology of representatives of all families of the ANITA grade and, in addition …
Angiosperm phylogeny inferred from sequences of four mitochondrial genes
YL QIU, L Li, B Wang, JY XUE… - … of Systematics and …, 2010 - Wiley Online Library
An angiosperm phylogeny was reconstructed in a maximum likelihood analysis of
sequences of four mitochondrial genes, atp1, matR, nad5, and rps3, from 380 species that …
sequences of four mitochondrial genes, atp1, matR, nad5, and rps3, from 380 species that …
An empirical assessment of long-branch attraction artefacts in deep eukaryotic phylogenomics
H Brinkmann, M Van der Giezen, Y Zhou… - Systematic …, 2005 - academic.oup.com
In the context of exponential growing molecular databases, it becomes increasingly easy to
assemble large multigene data sets for phylogenomic studies. The expected increase of …
assemble large multigene data sets for phylogenomic studies. The expected increase of …
An empirical test of the midpoint rooting method
PN Hess, CA De Moraes Russo - Biological Journal of the …, 2007 - academic.oup.com
The outgroup method is widely used to root phylogenetic trees. An accurate root indication,
however, strongly depends on the availability of a proper outgroup. An alternate rooting …
however, strongly depends on the availability of a proper outgroup. An alternate rooting …
The root of the angiosperms revisited
Most recent phylogenetic analyses of basal angiosperms have converged on the placement
of Amborella as sister to all other extant angiosperms. However, certain recent studies …
of Amborella as sister to all other extant angiosperms. However, certain recent studies …
A nonflowering land plant phylogeny inferred from nucleotide sequences of seven chloroplast, mitochondrial, and nuclear genes
YL Qiu, L Li, B Wang, Z Chen… - … journal of plant …, 2007 - journals.uchicago.edu
Nucleotide sequences of seven chloroplast (atpB and rbcL, SSU and LSU rDNAs),
mitochondrial (atp1, LSU rDNA), and nuclear (18S rDNA) genes from 192 land plants and …
mitochondrial (atp1, LSU rDNA), and nuclear (18S rDNA) genes from 192 land plants and …
Phylogenetic and evolutionary implications of complete chloroplast genome sequences of four early-diverging angiosperms: Buxus (Buxaceae), Chloranthus …
DR Hansen, SG Dastidar, Z Cai, C Penaflor… - Molecular Phylogenetics …, 2007 - Elsevier
We have determined the complete chloroplast genome sequences of four early-diverging
lineages of angiosperms, Buxus (Buxaceae), Chloranthus (Chloranthaceae), Dioscorea …
lineages of angiosperms, Buxus (Buxaceae), Chloranthus (Chloranthaceae), Dioscorea …
Rooting phylogenetic trees with distant outgroups: a case study from the commelinoid monocots
SW Graham, RG Olmstead… - Molecular biology and …, 2002 - academic.oup.com
Phylogenetic rooting experiments demonstrate that two chloroplast genes from commelinoid
monocot taxa that represent the closest living relatives of the pickerelweed family …
monocot taxa that represent the closest living relatives of the pickerelweed family …